(Q35855111)

10 August 2017

title

Spectral library searching in proteomics (English)

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10 August 2017

Johannes Griss

1

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publication date

30 November 2015

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10 August 2017

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10 August 2017

volume

16

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10 August 2017

issue

5

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10 August 2017

page(s)

729-740

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Computational analysis of shotgun proteomics data

10 August 2017

cites work

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A simple workflow to increase MS2 identification rate by subsequent spectral library search

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Artificial decoy spectral libraries for false discovery rate estimation in spectral library searching in proteomics

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Tracking the sources of blood meals of parasitic arthropods using shotgun proteomics and unidentified tandem mass spectral libraries

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Peptide identification from mixture tandem mass spectra

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QuickMod: A tool for open modification spectrum library searches

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Spectral library generating function for assessing spectrum-spectrum match significance

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Open source system for analyzing, validating, and storing protein identification data

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Identifying proteins in zebrafish embryos using spectral libraries generated from dissected adult organs and tissues

21 January 2018

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Quality control for building libraries from electrospray ionization tandem mass spectra

21 January 2018

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21 January 2018

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On the accuracy and limits of peptide fragmentation spectrum prediction

21 January 2018

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Extending the coverage of spectral libraries: a neighbor-based approach to predicting intensities of peptide fragmentation spectra

21 January 2018

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Confident site localization using a simulated phosphopeptide spectral library

21 January 2018

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Analysis and validation of proteomic data generated by tandem mass spectrometry

21 January 2018

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An improved method for the construction of decoy peptide MS/MS spectra suitable for the accurate estimation of false discovery rates

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201500296

Spectrum-based method to generate good decoy libraries for spectral library searching in peptide identifications

21 January 2018

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21 January 2018

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21 January 2018

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Spectral archives: extending spectral libraries to analyze both identified and unidentified spectra

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201500296

Identifying sources of tick blood meals using unidentified tandem mass spectral libraries

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201500296

Protein identification by spectral networks analysis

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201500296

Shotgun protein sequencing: assembly of peptide tandem mass spectra from mixtures of modified proteins.

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201500296

Automated de novo protein sequencing of monoclonal antibodies

21 January 2018

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A spectral clustering approach to MS/MS identification of post-translational modifications

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201500296

Current algorithmic solutions for peptide-based proteomics data generation and identification

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.1002/PMIC.201500296

1 reference

10 August 2017

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