(Q35874482)

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Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R. solani AG1-IA, AG1-IB, AG3 and AG8 Isolates

scientific article published on 21 December 2015

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Europe PubMed Central

PMC publication ID

10 August 2017

Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R. solani AG1-IA, AG1-IB, AG3 and AG8 Isolates (English)

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

Rhizoctonia solani

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Rhizoctonia solani

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inferred from title

10

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Alfred Pühler

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Oliver Rupp

2

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Alexander Goesmann

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Alexander Goesmann

7

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Andreas Schlüter

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Andreas Schlüter

11

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1

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Daniel Wibberg

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Europe PubMed Central

PMC publication ID

10 August 2017

9

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Rita Grosch

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Europe PubMed Central

PMC publication ID

10 August 2017

3

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Jochen Blom

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

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Lukas Jelonek

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Europe PubMed Central

PMC publication ID

10 August 2017

Magdalena Kröber

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Magdalena Kröber

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Europe PubMed Central

PMC publication ID

10 August 2017

Bart Verwaaijen

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Bart Verwaaijen

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Europe PubMed Central

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10 August 2017

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Stefan Albaum

8

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Europe PubMed Central

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10 August 2017

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publication date

21 December 2015

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Europe PubMed Central

PMC publication ID

10 August 2017

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Europe PubMed Central

PMC publication ID

10 August 2017

10

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Europe PubMed Central

PMC publication ID

10 August 2017

12

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

e0144769

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

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Creative Commons Attribution 4.0 International

21 December 2015

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April 2022 Public Data File from Crossref

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Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

Draft Genome Sequence of the Plant-Pathogenic Soil Fungus Rhizoctonia solani Anastomosis Group 3 Strain Rhs1AP

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

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SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models

1 reference

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11 July 2018

Genome sequencing and comparative genomics of the broad host-range pathogen Rhizoctonia solani AG8.

1 reference

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11 July 2018

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1 reference

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11 July 2018

The evolution and pathogenic mechanisms of the rice sheath blight pathogen

1 reference

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11 July 2018

Fast gapped-read alignment with Bowtie 2

1 reference

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11 July 2018

LTR retrotransposons in fungi

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11 July 2018

Endophytic life strategies decoded by genome and transcriptome analyses of the mutualistic root symbiont Piriformospora indica

1 reference

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11 July 2018

Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)

1 reference

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11 July 2018

EDGAR: a software framework for the comparative analysis of prokaryotic genomes

1 reference

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11 July 2018

The Sequence Analysis and Management System -- SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies

1 reference

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11 July 2018

Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations.

1 reference

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11 July 2018

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

1 reference

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11 July 2018

Cross-kingdom patterns of alternative splicing and splice recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

ASTALAVISTA: dynamic and flexible analysis of alternative splicing events in custom gene datasets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

DNA-DNA hybridization values and their relationship to whole-genome sequence similarities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

AUGUSTUS: ab initio prediction of alternative transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

11 July 2018

Genomic insights that advance the species definition for prokaryotes

1 reference

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11 July 2018

The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans

1 reference

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11 July 2018

GenDB--an open source genome annotation system for prokaryote genomes

1 reference

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11 July 2018

Computational inference of homologous gene structures in the human genome

1 reference

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11 July 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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11 July 2018

The role of cutinase in fungal pathogenicity

1 reference

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11 July 2018

Identification and functional analysis of AG1-IA specific genes of Rhizoctonia solani

1 reference

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24 September 2018

Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogen Rhizoctonia solani AG-3.

1 reference

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24 September 2018

Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4686921

24 September 2018

Fine-grained annotation and classification of de novo predicted LTR retrotransposons.

1 reference

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24 September 2018

Review. Biology and systematics of the form genus Rhizoctonia

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0144769

21 January 2018

Characterization of AG-13, a Newly Reported Anastomosis Group of Rhizoctonia solani

1 reference

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24 September 2018

Identifiers

10.1371/JOURNAL.PONE.0144769

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

2015PLoSO..1044769W

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

ResearchGate publication ID

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