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Chromatin in 3D: progress and prospects for plants
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scholarly article
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Europe PubMed Central
PMC publication ID
4546174
retrieved
11 August 2017
title
Chromatin in 3D: progress and prospects for plants
(English)
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stated in
Europe PubMed Central
PMC publication ID
4546174
retrieved
11 August 2017
author
Chang Liu
series ordinal
1
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Europe PubMed Central
PMC publication ID
4546174
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26294115%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
Detlef Weigel
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Detlef Weigel
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Europe PubMed Central
PMC publication ID
4546174
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26294115%20AND%20SRC:MED&resulttype=core&format=json
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1 June 2020
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publication date
21 August 2015
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Europe PubMed Central
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4546174
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11 August 2017
published in
Genome Biology
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Europe PubMed Central
PMC publication ID
4546174
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1 June 2020
volume
16
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Europe PubMed Central
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4546174
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1 June 2020
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170
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PMC publication ID
4546174
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1 June 2020
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21 August 2015
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https://scigraph.springernature.com/pub.10.1186/s13059-015-0738-6
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Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression
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2 October 2017
The Capsella rubella genome and the genomic consequences of rapid mating system evolution
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A conserved genetic pathway determines inflorescence architecture in Arabidopsis and rice
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The hierarchy of the 3D genome
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2 October 2017
Gene density, transcription, and insulators contribute to the partition of the Drosophila genome into physical domains
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Flowering time control: another window to the connection between antisense RNA and chromatin.
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MORC family ATPases required for heterochromatin condensation and gene silencing.
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2 October 2017
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2 October 2017
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2 October 2017
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2 October 2017
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
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2 October 2017
Regulation and identity of florigen: FLOWERING LOCUS T moves center stage
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2 October 2017
Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27.
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2 October 2017
Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions.
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2 October 2017
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2 October 2017
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2 October 2017
A role for the CPF 3'-end processing machinery in RNAP II-dependent gene looping
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2 October 2017
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2 October 2017
Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate
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2 October 2017
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PubMed Central
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11 July 2018
Genome-wide analysis of local chromatin packing in Arabidopsis thaliana.
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24 September 2018
Hi-C analysis in Arabidopsis identifies the KNOT, a structure with similarities to the flamenco locus of Drosophila.
1 reference
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PubMed Central
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24 September 2018
Nuclear factor Y-mediated H3K27me3 demethylation of the SOC1 locus orchestrates flowering responses of Arabidopsis.
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24 September 2018
Noncoding transcription by alternative RNA polymerases dynamically regulates an auxin-driven chromatin loop.
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24 September 2018
A distal CCAAT/NUCLEAR FACTOR Y complex promotes chromatin looping at the FLOWERING LOCUS T promoter and regulates the timing of flowering in Arabidopsis
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4546174
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24 September 2018
Physical clustering of FLC alleles during Polycomb-mediated epigenetic silencing in vernalization
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PubMed Central
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24 September 2018
Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.
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24 September 2018
Epigenetic regulation of repetitive elements is attenuated by prolonged heat stress in Arabidopsis.
1 reference
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24 September 2018
The flowering time regulator CONSTANS is recruited to the FLOWERING LOCUS T promoter via a unique cis-element.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4546174
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24 September 2018
Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target
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24 September 2018
A physiological role for gene loops in yeast.
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24 September 2018
Tissue- and expression level-specific chromatin looping at maize b1 epialleles.
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24 September 2018
Genome-wide transposon tagging reveals location-dependent effects on transcription and chromatin organization in Arabidopsis.
1 reference
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24 September 2018
The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4546174
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24 September 2018
Large-scale dissociation and sequential reassembly of pericentric heterochromatin in dedifferentiated Arabidopsis cells.
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24 September 2018
The BAF60 subunit of the SWI/SNF chromatin-remodeling complex directly controls the formation of a gene loop at FLOWERING LOCUS C in Arabidopsis
1 reference
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21 January 2018
Non-Rabl patterns of centromere and telomere distribution in the interphase nuclei of plant cells
1 reference
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PubMed
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https://pubmed.ncbi.nlm.nih.gov/26294115
retrieved
12 December 2020
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inferred from PubMed ID database lookup
Arabidopsis displays centromeric DNA hypomethylation and cytological alterations of heterochromatin upon attack by pseudomonas syringae
1 reference
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12 December 2020
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Strategies to mitigate transgene-promoter interactions
1 reference
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/S13059-015-0738-6
1 reference
stated in
Europe PubMed Central
PMC publication ID
4546174
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26294115%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
Dimensions Publication ID
1051097871
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PMC publication ID
4546174
1 reference
stated in
Europe PubMed Central
PMC publication ID
4546174
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26294115%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
PubMed publication ID
26294115
1 reference
stated in
Europe PubMed Central
PMC publication ID
4546174
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26294115%20AND%20SRC:MED&resulttype=core&format=json
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1 June 2020
ResearchGate publication ID
281139250
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