(Q36063007)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

title

Functional CRISPR screening identifies the ufmylation pathway as a regulator of SQSTM1/p62 (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

0 references

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Beat Nyfeler

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

9

John S Reece-Hoyes

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

16

Guglielmo Roma

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

author name string

Rowena DeJesus

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Francesca Moretti

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Gregory McAllister

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Zuncai Wang

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Phil Bergman

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Shanming Liu

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Elizabeth Frias

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

John Alford

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Alicia Lindeman

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Jennifer Kelliher

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Carsten Russ

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Judith Knehr

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Martin Beibel

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Aylwin Ng

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

John A Tallarico

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Jeffery A Porter

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Ramnik J Xavier

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Craig Mickanin

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Leon O Murphy

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Gregory R Hoffman

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

language of work or name

English

0 references

publication date

28 June 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

volume

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

16 March 2020

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4924995/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/4924995

based on heuristic

inferred from PubMed Central ID database lookup

DESeq2

object named as

DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

CellProfiler

object named as

CellProfiler

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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Parallel shRNA and CRISPR-Cas9 screens enable antiviral drug target identification

2 October 2017

1 reference

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Structural and Functional Analysis of a Novel Interaction Motif within UFM1-activating Enzyme 5 (UBA5) Required for Binding to Ubiquitin-like Proteins and Ufmylation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

Macroautophagy is dispensable for growth of KRAS mutant tumors and chloroquine efficacy

2 October 2017

1 reference

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Identification and characterization of essential genes in the human genome.

2 October 2017

1 reference

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p62/SQSTM1 functions as a signaling hub and an autophagy adaptor

2 October 2017

1 reference

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RCAD/Ufl1, a Ufm1 E3 ligase, is essential for hematopoietic stem cell function and murine hematopoiesis

2 October 2017

1 reference

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limma powers differential expression analyses for RNA-sequencing and microarray studies

2 October 2017

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

2 October 2017

1 reference

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Selective VPS34 inhibitor blocks autophagy and uncovers a role for NCOA4 in ferritin degradation and iron homeostasis in vivo

2 October 2017

1 reference

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Modification of ASC1 by UFM1 is crucial for ERα transactivation and breast cancer development

2 October 2017

1 reference

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2 October 2017

1 reference

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Cargo recognition and trafficking in selective autophagy

2 October 2017

1 reference

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Functional epigenetics approach identifies BRM/SMARCA2 as a critical synthetic lethal target in BRG1-deficient cancers

2 October 2017

1 reference

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DNA interrogation by the CRISPR RNA-guided endonuclease Cas9.

2 October 2017

1 reference

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Genetic screens in human cells using the CRISPR-Cas9 system

2 October 2017

1 reference

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DNA targeting specificity of RNA-guided Cas9 nucleases

2 October 2017

1 reference

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High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells

2 October 2017

1 reference

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Multiplex genome engineering using CRISPR/Cas systems

2 October 2017

1 reference

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SQSTM1 mutations in frontotemporal lobar degeneration and amyotrophic lateral sclerosis

2 October 2017

1 reference

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Transient aggregation of ubiquitinated proteins is a cytosolic unfolded protein response to inflammation and endoplasmic reticulum stress

2 October 2017

1 reference

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Fast gapped-read alignment with Bowtie 2

2 October 2017

1 reference

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Autophagy: renovation of cells and tissues

2 October 2017

1 reference

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Image-based genome-wide siRNA screen identifies selective autophagy factors

2 October 2017

1 reference

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p62 is a key regulator of nutrient sensing in the mTORC1 pathway.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47

2 October 2017

1 reference

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p62/SQSTM1 is a target gene for transcription factor NRF2 and creates a positive feedback loop by inducing antioxidant response element-driven gene transcription

2 October 2017

1 reference

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2 October 2017

1 reference

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Regulation mechanisms and signaling pathways of autophagy

2 October 2017

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

2 October 2017

1 reference

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Integrative molecular concept modeling of prostate cancer progression.

2 October 2017

1 reference

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2 October 2017

1 reference

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p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death

2 October 2017

1 reference

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A novel protein-conjugating system for Ufm1, a ubiquitin-fold modifier

2 October 2017

1 reference

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Recurrent mutation of the gene encoding sequestosome 1 (SQSTM1/p62) in Paget disease of bone

2 October 2017

1 reference

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CRISPR knockout screening outperforms shRNA and CRISPRi in identifying essential genes.

2 October 2017

1 reference

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UFBP1, a Key Component of the Ufm1 Conjugation System, Is Essential for Ufmylation-Mediated Regulation of Erythroid Development.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

Proteasome dysfunction activates autophagy and the Keap1-Nrf2 pathway

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

Autophagy-deficient mice develop multiple liver tumors

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

Mature-onset obesity and insulin resistance in mice deficient in the signaling adapter p62.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

CRISPR Screens Provide a Comprehensive Assessment of Cancer Vulnerabilities but Generate False-Positive Hits for Highly Amplified Genomic Regions.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

Quantitative visualization of autophagy induction by mTOR inhibitors

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

A probability-based approach for the analysis of large-scale RNAi screens.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

Generation of cell lines with tetracycline-regulated autophagy and a role for autophagy in controlling cell size

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4924995

Depth-First Search and Linear Graph Algorithms

23 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.7554%2FELIFE.17290

21 January 2018

Identifiers

DOI

10.7554/ELIFE.17290

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27351204%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

PubMed publication ID

27351204

1 reference