(Q36066871)

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Characterization of Foodborne Outbreaks of Salmonella enterica Serovar Enteritidis with Whole-Genome Sequencing Single Nucleotide Polymorphism-Based Analysis for Surveillance and Outbreak Detection

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Characterization of Foodborne Outbreaks of Salmonella enterica Serovar Enteritidis with Whole-Genome Sequencing Single Nucleotide Polymorphism-Based Analysis for Surveillance and Outbreak Detection (English)

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Salmonella enterica

0 references

single-nucleotide polymorphism

1 reference

based on heuristic

inferred from title

Salmonella enteritidis

object named as

Salmonella enterica Serovar Enteritidis

1 reference

based on heuristic

inferred from title

whole genome sequencing

1 reference

based on heuristic

inferred from title

6

object named as

Carlota Medus

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

author name string

Angela J Taylor

1

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Victoria Lappi

2

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

William J Wolfgang

3

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Pascal Lapierre

4

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Michael J Palumbo

5

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

David Boxrud

7

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

language of work or name

0 references

publication date

12 August 2015

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Journal of Clinical Microbiology

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

53

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

10

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

3334-3340

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Salmonella serotype determination utilizing high-throughput genome sequencing data

1 reference

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2 October 2017

Comparative analysis of subtyping methods against a whole-genome-sequencing standard for Salmonella enterica serotype Enteritidis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4572550

2 October 2017

Development of a new molecular subtyping tool for Salmonella enterica serovar Enteritidis based on single nucleotide polymorphism genotyping using PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4572550

2 October 2017

Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis

1 reference

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2 October 2017

Whole-genome-based Mycobacterium tuberculosis surveillance: a standardized, portable, and expandable approach.

1 reference

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2 October 2017

Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli

1 reference

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2 October 2017

Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica

1 reference

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2 October 2017

Rapid bacterial whole-genome sequencing to enhance diagnostic and public health microbiology

1 reference

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2 October 2017

Real-time genomic epidemiological evaluation of human Campylobacter isolates by use of whole-genome multilocus sequence typing

1 reference

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2 October 2017

Attribution of foodborne illnesses, hospitalizations, and deaths to food commodities by using outbreak data, United States, 1998-2008

1 reference

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2 October 2017

Whole genome sequencing identifies zoonotic transmission of MRSA isolates with the novel mecA homologue mecC

1 reference

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2 October 2017

Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study

1 reference

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2 October 2017

On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004.

1 reference

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2 October 2017

Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study

1 reference

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2 October 2017

Fighting outbreaks with bacterial genomics: case review and workflow proposal

1 reference

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2 October 2017

Tracking a hospital outbreak of carbapenem-resistant Klebsiella pneumoniae with whole-genome sequencing

1 reference

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2 October 2017

Routine use of microbial whole genome sequencing in diagnostic and public health microbiology

1 reference

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2 October 2017

Transforming clinical microbiology with bacterial genome sequencing.

1 reference

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2 October 2017

Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak

1 reference

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2 October 2017

A pilot study of rapid benchtop sequencing of Staphylococcus aureus and Clostridium difficile for outbreak detection and surveillance

1 reference

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2 October 2017

High-resolution single nucleotide polymorphism analysis distinguishes recrudescence and reinfection in recurrent invasive nontyphoidal Salmonella typhimurium disease

1 reference

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2 October 2017

Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4572550

2 October 2017

High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach

1 reference

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2 October 2017

A whole-genome single nucleotide polymorphism-based approach to trace and identify outbreaks linked to a common Salmonella enterica subsp. enterica serovar Montevideo pulsed-field gel electrophoresis type

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4572550

2 October 2017

PHAST: a fast phage search tool

1 reference

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2 October 2017

Whole-genome sequencing and social-network analysis of a tuberculosis outbreak

1 reference

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2 October 2017

Genomic tracing of epidemics and disease outbreaks

1 reference

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2 October 2017

Foodborne illness acquired in the United States--major pathogens

1 reference

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2 October 2017

The origin of the Haitian cholera outbreak strain

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1 reference

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2 October 2017

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1 reference

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Next-generation gap.

1 reference

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Comparison of molecular typing methods for the differentiation of Salmonella foodborne pathogens

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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12 December 2020

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Identifiers

10.1128/JCM.01280-15

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

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