(Q34576272)

3 August 2017

title

On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004. (English)

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3 August 2017

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Salmonella enteritidis

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5

Ruth Timme

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3 August 2017

Marc W Allard

1

1 reference

3 August 2017

Yan Luo

2

1 reference

3 August 2017

Errol Strain

3

1 reference

3 August 2017

James Pettengill

4

1 reference

3 August 2017

Charles Wang

6

1 reference

3 August 2017

Cong Li

7

1 reference

3 August 2017

Christine E Keys

8

1 reference

3 August 2017

Jie Zheng

9

1 reference

3 August 2017

Robert Stones

10

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3 August 2017

Mark R Wilson

11

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3 August 2017

Steven M Musser

12

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3 August 2017

Eric W Brown

13

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3 August 2017

language of work or name

English

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publication date

30 January 2013

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3 August 2017

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3 August 2017

volume

8

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3 August 2017

issue

1

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3 August 2017

page(s)

e55254

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Creative Commons CC0 License

3 August 2017

copyright license

start time

30 January 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

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7 July 2018

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7 July 2018

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Characterization of DalS, an ATP-binding Cassette Transporter for D-Alanine, and Its Role in Pathogenesis in Salmonella enterica

7 July 2018

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Genomic variation in Salmonella enterica core genes for epidemiological typing

7 July 2018

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H-NS regulation of IraD and IraM antiadaptors for control of RpoS degradation

7 July 2018

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Genomic Comparison of the Closely Related Salmonella enterica Serovars Enteritidis and Dublin

7 July 2018

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Phylogeny of Shiga toxin-producing Escherichia coli O157 isolated from cattle and clinically ill humans

7 July 2018

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Complete genome sequence of Salmonella enterica serovar Typhimurium bacteriophage SPN3UB.

7 July 2018

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Inhibition of bacterial virulence: drug-like molecules targeting the Salmonella enterica PhoP response regulator

7 July 2018

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High-resolution single nucleotide polymorphism analysis distinguishes recrudescence and reinfection in recurrent invasive nontyphoidal Salmonella typhimurium disease

7 July 2018

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Salmonella Enteritidis strains from poultry exhibit differential responses to acid stress, oxidative stress, and survival in the egg albumen

7 July 2018

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High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach

7 July 2018

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Complete genome sequence of Salmonella enterica serovar pullorum RKS5078.

7 July 2018

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Characterization of the ELPhiS prophage from Salmonella enterica serovar Enteritidis strain LK5.

7 July 2018

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Complete genome sequence of Salmonella enterica serovar typhimurium bacteriophage SPN1S.

7 July 2018

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Whole genome sequence analysis of Cryptococcus gattii from the Pacific Northwest reveals unexpected diversity

7 July 2018

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Genomic anatomy of Escherichia coli O157:H7 outbreaks

7 July 2018

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7 July 2018

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Infection of mice by Salmonella enterica serovar Enteritidis involves additional genes that are absent in the genome of serovar Typhimurium

7 July 2018

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Molecular investigations of a locally acquired case of melioidosis in Southern AZ, USA

7 July 2018

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A whole-genome single nucleotide polymorphism-based approach to trace and identify outbreaks linked to a common Salmonella enterica subsp. enterica serovar Montevideo pulsed-field gel electrophoresis type

7 July 2018

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Single nucleotide polymorphisms that differentiate two subpopulations of Salmonella enteritidis within phage type

7 July 2018

1 reference

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Population genetics of Vibrio cholerae from Nepal in 2010: evidence on the origin of the Haitian outbreak

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

The Salmonella enterica pan-genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Are pathogenic bacteria just looking for food? Metabolism and microbial pathogenesis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Subtyping Salmonella enterica serovar enteritidis isolates from different sources by using sequence typing based on virulence genes and clustered regularly interspaced short palindromic repeats (CRISPRs)

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Whole-genome sequencing and social-network analysis of a tuberculosis outbreak

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Removing noise from pyrosequenced amplicons

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

The origin of the Haitian cholera outbreak strain

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Evolution of MRSA during hospital transmission and intercontinental spread

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

The National Center for Biotechnology Information's Protein Clusters Database

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Predicting Salmonella enterica serotypes by repetitive sequence-based PCR.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Molecular phylogeny of the salmonellae: relationships among Salmonella species and subspecies determined from four housekeeping genes and evidence of lateral gene transfer events

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Enhanced subtyping scheme for Salmonella enteritidis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Limited genetic diversity in Salmonella enterica serovar Enteritidis PT13

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Multiplex, bead-based suspension array for molecular determination of common Salmonella serogroups

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

DNA sequence-based subtyping and evolutionary analysis of selected Salmonella enterica serotypes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Genome sequencing in microfabricated high-density picolitre reactors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Molecular applications for identifying microbial pathogens in the post-9/11 era.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Mauve: multiple alignment of conserved genomic sequence with rearrangements

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Clonal lines of Salmonella enterica serotype Enteritidis documented by IS200-, ribo-, pulsed-field gel electrophoresis and RFLP typing.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

A phage-typing scheme for Salmonella enteritidis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Molecular phylogenetic typing of pandemic isolates of Salmonella enteritidis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Comparative genomic analysis of Salmonella enterica subsp. enterica serovar Weltevreden foodborne strains with other serovars.

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055254

Identification of a salmonellosis outbreak by means of molecular sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055254

An enhanced discriminatory pulsed-field gel electrophoresis scheme for subtyping Salmonella serotypes Heidelberg, Kentucky, SaintPaul, and Hadar

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055254

TNT, a free program for phylogenetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055254

Evolution of genes on the Salmonella Virulence plasmid phylogeny revealed from sequencing of the virulence plasmids of S. enterica serotype Dublin and comparative analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055254

Inheritance of the Salmonella virulence plasmids: mostly vertical and rarely horizontal.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055254

Bacterial pathogenesis: A competitive edge for Salmonella.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Limited genetic diversity and gene expression differences between egg- and non-egg-related Salmonella Enteritidis strains.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Clonal structure and variation in virulence of Salmonella enteritidis isolated from mice, chickens, and humans.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Determination of close genetic relatedness of the major Salmonella enteritidis phage types by pulsed-field gel electrophoresis and DNA sequence analysis of several Salmonella virulence genes.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559427

Rapidly Progressive, Fatal, Inhalation Anthrax-like Infection in a Human: Case Report, Pathogen Genome Sequencing, Pathology, and Coordinated Response

27 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055254

10.1371/JOURNAL.PONE.0055254

21 January 2018

Identifiers

DOI

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3 August 2017

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3 August 2017

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