(Q36959719)

17 August 2017

Human SWI/SNF directs sequence-specific chromatin changes on promoter polynucleosomes (English)

1 reference

17 August 2017

Hillel I Sims

1

1 reference

17 August 2017

Cassandra B Baughman

series ordinal

2

1 reference

17 August 2017

Gavin R Schnitzler

series ordinal

3

1 reference

17 August 2017

language of work or name

English

0 references

publication date

27 September 2008

1 reference

17 August 2017

Nucleic Acids Research

1 reference

17 August 2017

36

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17 August 2017

19

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17 August 2017

6118-6131

1 reference

describes a project that uses

17 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2577362/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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29 September 2017

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Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

29 September 2017

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Dynamic regulation of nucleosome positioning in the human genome

29 September 2017

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29 September 2017

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Chromatin remodeling: insights and intrigue from single-molecule studies

29 September 2017

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DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes

29 September 2017

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Human SWI/SNF drives sequence-directed repositioning of nucleosomes on C-myc promoter DNA minicircles

29 September 2017

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A high-resolution atlas of nucleosome occupancy in yeast

29 September 2017

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Nucleosome positioning signals in genomic DNA

29 September 2017

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Exposing the core promoter is sufficient to activate transcription and alter coactivator requirement at RNR3.

29 September 2017

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Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.

29 September 2017

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Chromatin remodeling by SWI/SNF results in nucleosome mobilization to preferential positions in the rat osteocalcin gene promoter

29 September 2017

1 reference

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Distinct mammalian SWI/SNF chromatin remodeling complexes with opposing roles in cell-cycle control

29 September 2017

1 reference

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Flexibility and constraint in the nucleosome core landscape of Caenorhabditis elegans chromatin

29 September 2017

1 reference

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A genomic code for nucleosome positioning

29 September 2017

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Chromatin remodelling: the industrial revolution of DNA around histones

29 September 2017

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Chromatin remodelling in mammalian differentiation: lessons from ATP-dependent remodellers

29 September 2017

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Human SWI/SNF generates abundant, structurally altered dinucleosomes on polynucleosomal templates

29 September 2017

1 reference

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SWI/SNF: the crossroads where extracellular signaling pathways meet chromatin.

29 September 2017

1 reference

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Changes in attitude, changes in latitude: nuclear receptors remodeling chromatin to regulate transcription

29 September 2017

1 reference

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Genome-scale identification of nucleosome positions in S. cerevisiae

29 September 2017

1 reference

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Nucleosomes facilitate their own invasion

29 September 2017

1 reference

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Histone H2A/H2B dimer exchange by ATP-dependent chromatin remodeling activities

29 September 2017

1 reference

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Pharmacogenomics of human UDP-glucuronosyltransferase enzymes

29 September 2017

1 reference

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Mechanisms for nucleosome mobilization

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

SWI/SNF unwraps, slides, and rewraps the nucleosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Spontaneous access of proteins to buried nucleosomal DNA target sites occurs via a mechanism that is distinct from nucleosome translocation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Nucleosome remodeling by the human SWI/SNF complex requires transient global disruption of histone-DNA interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Functional involvement of the Brahma/SWI2-related gene 1 protein in cytochrome P4501A1 transcription mediated by the aryl hydrocarbon receptor complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

SWI/SNF chromatin remodeling and cancer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Generation and interconversion of multiple distinct nucleosomal states as a mechanism for catalyzing chromatin fluidity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Transcriptional regulation in the context of chromatin structure

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Direct imaging of human SWI/SNF-remodeled mono- and polynucleosomes by atomic force microscopy employing carbon nanotube tips

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

The chromatin structure of the dual c-myc promoter P1/P2 is regulated by separate elements

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

BRG-1 is recruited to estrogen-responsive promoters and cooperates with factors involved in histone acetylation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

A model for chromatin remodeling by the SWI/SNF family

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Chromatin remodelling by the glucocorticoid receptor requires the BRG1 complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Nucleosomal structure of active and inactive c-myc genes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

A positive role for nucleosome mobility in the transcriptional activity of chromatin templates: restriction by linker histones

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Histones H2A/H2B inhibit the interaction of transcription factor IIIA with the Xenopus borealis somatic 5S RNA gene in a nucleosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

The c-myc gene is a direct target of mammalian SWI/SNF-related complexes during differentiation-associated cell cycle arrest

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Activation of the mouse TATA-less and human TATA-containing UDP-glucuronosyltransferase 1A1 promoters by hepatocyte nuclear factor 1.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Transcriptional regulation of human UGT1A1 gene expression through distal and proximal promoter motifs: implication of defects in the UGT1A1 gene promoter

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

High-throughput mapping of the chromatin structure of human promoters.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Sequential roles of Brg, the ATPase subunit of BAF chromatin remodeling complexes, in thymocyte development

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Distinct strategies to make nucleosomal DNA accessible

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Human SWI/SNF interconverts a nucleosome between its base state and a stable remodeled state

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Transcriptional Regulation of Human UGT1A1 Gene Expression: Activated Glucocorticoid Receptor Enhances constitutive Androstane Receptor/Pregnane X Receptor-Mediated UDP-Glucuronosyltransferase 1A1 Regulation with Glucocorticoid Receptor-Interacting P

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577362

Nucleosome positions predicted through comparative genomics

20 October 2018

1 reference

12 December 2020

Inverted factor access and slow reversion characterize SWI/SNF-altered nucleosome dimers

1 reference

12 December 2020

Linker Histone H1 Modulates Nucleosome Remodeling by Human SWI/SNF

1 reference

12 December 2020

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKN623

1 reference

17 August 2017

1 reference

17 August 2017

PubMed publication ID

18820294

1 reference