(Q37052129)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18773979%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

title

Mechanism of the chemical step for the guanosine triphosphate (GTP) hydrolysis catalyzed by elongation factor Tu (English)

1 reference

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13 January 2020

author

Alexander V. Nemukhin

5

1 reference

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13 January 2020

author name string

B L Grigorenko

1

1 reference

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13 January 2020

M S Shadrina

2

1 reference

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13 January 2020

I A Topol

3

1 reference

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13 January 2020

J R Collins

4

1 reference

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13 January 2020

language of work or name

English

0 references

publication date

16 August 2008

1 reference

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13 January 2020

number of pages

10

1 reference

Biochimica et Biophysica Acta

inferred from page(s)

published in

1 reference

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13 January 2020

volume

1784

1 reference

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13 January 2020

issue

12

1 reference

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13 January 2020

page(s)

1908-1917

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18773979%20AND%20SRC:MED&resulttype=core&format=json

All-atom empirical potential for molecular modeling and dynamics studies of proteins

13 January 2020

cites work

1 reference

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29 September 2017

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29 September 2017

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A phosphoryl transfer intermediate in the GTPase reaction of Ras in complex with its GTPase-activating protein

29 September 2017

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Phosphoryl transfer in Ras proteins, conclusive or elusive?

29 September 2017

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Crystallographic evidence for substrate-assisted GTP hydrolysis by a small GTP binding protein

29 September 2017

1 reference

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GTP hydrolysis mechanism of Ras-like GTPases

29 September 2017

1 reference

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Why does the Ras switch "break" by oncogenic mutations?

29 September 2017

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Conformational change of elongation factor Tu (EF-Tu) induced by antibiotic binding. Crystal structure of the complex between EF-Tu.GDP and aurodox

29 September 2017

1 reference

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Substrate assisted catalysis -- application to G proteins.

29 September 2017

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29 September 2017

The Protein Data Bank

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The pre-hydrolysis state of p21(ras) in complex with GTP: new insights into the role of water molecules in the GTP hydrolysis reaction of ras-like proteins

29 September 2017

1 reference

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Mechanistic alternatives in phosphate monoester hydrolysis: what conclusions can be drawn from available experimental data?

29 September 2017

1 reference

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G protein mechanisms: insights from structural analysis

29 September 2017

1 reference

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Elongation factor Tu, a GTPase triggered by codon recognition on the ribosome: mechanism and GTP consumption

29 September 2017

1 reference

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Ras-catalyzed hydrolysis of GTP: a new perspective from model studies

29 September 2017

1 reference

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The crystal structure of elongation factor EF-Tu from Thermus aquaticus in the GTP conformation

29 September 2017

1 reference

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GTPase mechanism of Gproteins from the 1.7-A crystal structure of transducin alpha-GDP-AIF-4

29 September 2017

1 reference

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Site-directed mutagenesis of Thermus thermophilus elongation factor Tu. Replacement of His85, Asp81 and Arg300.

29 September 2017

1 reference

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The GTPase superfamily: a conserved switch for diverse cell functions

29 September 2017

1 reference

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Theoretical studies of enzymic reactions: dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme

29 September 2017

1 reference

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How does GAP catalyze the GTPase reaction of Ras? A computer simulation study

29 September 2017

1 reference

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Complete kinetic mechanism of elongation factor Tu-dependent binding of aminoacyl-tRNA to the A site of the E. coli ribosome

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621105

Why have mutagenesis studies not located the general base in ras p21.

27 June 2018

1 reference

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Role of the arginine finger in Ras.RasGAP revealed by QM/MM calculations

27 June 2018

1 reference

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Insights into the chemomechanical coupling of the myosin motor from simulation of its ATP hydrolysis mechanism.

4 September 2018

1 reference

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Mechanism of triphosphate hydrolysis in aqueous solution: QM/MM simulations in water clusters

4 September 2018

1 reference

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QM/MM modeling the Ras-GAP catalyzed hydrolysis of guanosine triphosphate.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621105

Quantum chemical modeling of the GTP hydrolysis by the RAS-GAP protein complex

4 September 2018

1 reference

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Theoretical Studies on the Hydrolysis of Mono-Phosphate and Tri-Phosphate in Gas Phase and Aqueous Solution

4 September 2018

1 reference

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Essential role of histidine 84 in elongation factor Tu for the chemical step of GTP hydrolysis on the ribosome

4 September 2018

1 reference

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Substitution of histidine-84 and the GTPase mechanism of elongation factor Tu.

4 September 2018

1 reference

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Mechanisms of guanosine triphosphate hydrolysis by Ras and Ras-GAP proteins as rationalized by ab initio QM/MM simulations

4 September 2018

1 reference

12 December 2020

On the mechanism of guanosine triphosphate hydrolysis in ras p21 proteins

1 reference

12 December 2020

Relevance of histidine-84 in the elongation factor Tu GTPase activity and in poly(Phe) synthesis: its substitution by glutamine and alanine

1 reference

12 December 2020

Flexible effective fragment QM/MM method: validation through the challenging tests

1 reference

12 December 2020

10.1016/J.BBAPAP.2008.08.003

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18773979%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18773979%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

1 reference