(Q37113968)

18 August 2017

MHCcluster, a method for functional clustering of MHC molecules (English)

1 reference

18 August 2017

Morten Nielsen

5

0 references

Ole Lund

object named as

Ole Lund

series ordinal

4

0 references

Claus Lundegaard

series ordinal

2

object named as

Claus Lundegaard

1 reference

18 August 2017

3

Søren Buus

1 reference

18 August 2017

Martin Thomsen

1

1 reference

PMCID

3750724

18 August 2017

language of work or name

English

0 references

publication date

18 June 2013

1 reference

18 August 2017

1 reference

18 August 2017

65

1 reference

18 August 2017

9

1 reference

18 August 2017

655-665

1 reference

https://scigraph.springernature.com/pub.10.1007/s00251-013-0714-9

18 August 2017

0 references

cites work

Seq2Logo: a method for construction and visualization of amino acid binding motifs and sequence profiles including sequence weighting, pseudo counts and two-sided representation of amino acid enrichment and depletion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

HLArestrictor--a tool for patient-specific predictions of HLA restriction elements and optimal epitopes within peptides

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

NetMHCIIpan-2.0 - Improved pan-specific HLA-DR predictions using a novel concurrent alignment and weight optimization training procedure.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Real-time, high-throughput measurements of peptide-MHC-I dissociation using a scintillation proximity assay

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Major histocompatibility complex class I binding predictions as a tool in epitope discovery.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

MHC class II epitope predictive algorithms.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

The immune epitope database 2.0.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

NetMHCpan, a method for MHC class I binding prediction beyond humans

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: NetMHCIIpan

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Clustal W and Clustal X version 2.0

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Application of phylogenetic networks in evolutionary studies

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Identifiying human MHC supertypes using bioinformatic methods.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

New allele frequency database: http://www.allelefrequencies.net

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Selection of representative protein data sets

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Database resources of the National Center for Biotechnology Information

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

A comparative analysis of viral peptides presented by contemporary human and chimpanzee MHC class I molecules.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

NetMHCcons: a consensus method for the major histocompatibility complex class I predictions

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

The MHC motif viewer: a visualization tool for MHC binding motifs

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Peptide binding to HLA class I molecules: homogenous, high-throughput screening, and affinity assays.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

A comparative study of HLA binding affinity and ligand diversity: implications for generating immunodominant CD8+ T cell responses

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Pinpointing a selective sweep to the chimpanzee MHC class I region by comparative genomics

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Identifying HLA supertypes by learning distance functions.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

Definition of supertypes for HLA molecules using clustering of specificity matrices.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750724

3 September 2018

The IMGT/HLA database

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23775223

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S00251-013-0714-9

1 reference

release_wkm4347qjjfwrjfcx6cwm45btu

18 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/wkm4347qjjfwrjfcx6cwm45btu

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

3750724

1 reference

18 August 2017

1 reference

PMCID

3750724