(Q37168812)

English

Energy-based de novo protein folding by conformational space annealing and an off-lattice united-residue force field: application to the 10-55 fragment of staphylococcal protein A and to apo calbindin D9K.

scientific article published on March 1999

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

18 August 2017

Energy-based de novo protein folding by conformational space annealing and an off-lattice united-residue force field: application to the 10-55 fragment of staphylococcal protein A and to apo calbindin D9K. (English)

1 reference

Europe PubMed Central

18 August 2017

protein folding

0 references

0 references

Harold A. Scheraga

3

object named as

H A Scheraga

1 reference

Europe PubMed Central

18 August 2017

author name string

J Lee

1

1 reference

Europe PubMed Central

18 August 2017

A Liwo

2

1 reference

Europe PubMed Central

18 August 2017

language of work or name

0 references

publication date

1 March 1999

1 reference

Europe PubMed Central

18 August 2017

Proceedings of the National Academy of Sciences of the United States of America

1 reference

Europe PubMed Central

18 August 2017

96

1 reference

Europe PubMed Central

18 August 2017

2025-2030

1 reference

Europe PubMed Central

18 August 2017

5

1 reference

Europe PubMed Central

18 August 2017

Protein structure prediction by threading. Why it works and why it does not.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

What is the probability of a chance prediction of a protein structure with an rmsd of 6 A?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Progress in protein structure prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Improved genetic algorithm for the protein folding problem by use of a Cartesian combination operator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

How optimization of potential functions affects protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Assigning amino acid sequences to 3-dimensional protein folds.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Alignment and searching for common protein folds using a data bank of structural templates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Prediction of protein conformation on the basis of a search for compact structures: test on avian pancreatic polypeptide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Monte Carlo simulations of protein folding. II. Application to protein A, ROP, and crambin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Determination of the solution structure of Apo calbindin D9k by NMR spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

How does a protein fold?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Prediction of conformation of rat galanin in the presence and absence of water with the use of Monte Carlo methods and the ECEPP/3 force field

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Calculation of protein backbone geometry from alpha-carbon coordinates based on peptide-group dipole alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Principles that govern the folding of protein chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Monte Carlo-minimization approach to the multiple-minima problem in protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Effects of compact volume and chain stiffness on the conformations of native proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Proline cis-trans isomers in calbindin D9k observed by X-ray crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Protein tertiary structure recognition using optimized Hamiltonians with local interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Three-dimensional solution structure of the B domain of staphylococcal protein A: comparisons of the solution and crystal structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Computer simulation of protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

The Protein Data Bank: a computer-based archival file for macromolecular structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

6 September 2017

Recent developments in the theory of protein folding: searching for the global energy minimum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

28 September 2017

Boltzmann's principle, knowledge-based mean fields and protein folding. An approach to the computational determination of protein structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

28 September 2017

Conformational analysis of the 20-residue membrane-bound portion of melittin by conformational space annealing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

27 June 2018

Conversion from a virtual-bond chain to a complete polypeptide backbone chain.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

27 June 2018

Computation of structures of homologous proteins. .alpha.-Lactalbumin from lysozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

27 June 2018

Using known substructures in protein model building and crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

27 June 2018

Protein topology prediction through constraint-based search and the evaluation of topological folding rules.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

27 June 2018

Application of a directed conformational search for generating 3-D coordinates for protein structures from alpha-carbon coordinates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

27 June 2018

Extracting information on folding from the amino acid sequence: consensus regions with preferred conformation in homologous proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26730

27 June 2018

MONSSTER: a method for folding globular proteins with a small number of distance restraints

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.5.2025

21 January 2018

Simulations of the folding of a globular protein.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.5.2025

21 January 2018

Monte Carlo simulations of protein folding. I. Lattice model and interaction scheme.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.5.2025

21 January 2018

Efficient algorithm for the reconstruction of a protein backbone from the ?-carbon coordinates

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.5.2025

21 January 2018

A potential function for conformational analysis of proteins

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.5.2025

21 January 2018

Identifiers

10.1073/PNAS.96.5.2025

1 reference

Europe PubMed Central

18 August 2017

1999PNAS...96.2025L

0 references

1 reference

Europe PubMed Central

18 August 2017

1 reference

Europe PubMed Central

18 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q37168812&oldid=2015023579"