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Rho directs widespread termination of intragenic and stable RNA transcription.
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2741264
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
title
Rho directs widespread termination of intragenic and stable RNA transcription
(English)
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2741264
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
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6 February 2020
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Jennifer L Rowland
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4
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2741264
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
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6 February 2020
Robert Landick
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Robert Landick
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2741264
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6 February 2020
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Jason M Peters
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1
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2741264
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6 February 2020
Rachel A Mooney
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2
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6 February 2020
Pei Fen Kuan
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3
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2741264
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
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6 February 2020
Sündüz Keles
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5
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2741264
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
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6 February 2020
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English
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20 August 2009
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2741264
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6 February 2020
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6
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Proceedings of the National Academy of Sciences of the United States of America
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2741264
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6 February 2020
volume
106
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Europe PubMed Central
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2741264
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
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6 February 2020
issue
36
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Europe PubMed Central
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2741264
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
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6 February 2020
page(s)
15406-15411
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Europe PubMed Central
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2741264
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
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6 February 2020
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Europe PubMed Central
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22 June 2022
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https://europepmc.org/article/PMC/2741264
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cites work
Regulatory RNAs in bacteria
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Regulator trafficking on bacterial transcription units in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Stochasticity and traffic jams in the transcription of ribosomal RNA: Intriguing role of termination and antitermination
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Repression of small toxic protein synthesis by the Sib and OhsC small RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
CMARRT: a tool for the analysis of ChIP-chip data from tiling arrays by incorporating the correlation structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Ribonuclease P processes polycistronic tRNA transcripts in Escherichia coli independent of ribonuclease E.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Overlapping pathways dictate termination of RNA polymerase II transcription.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Identification of small RNAs in diverse bacterial species
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
How Rho exerts its muscle on RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Rho-dependent transcription termination: more questions than answers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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How to find small non-coding RNAs in bacteria
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
affy--analysis of Affymetrix GeneChip data at the probe level
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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Normalization of cDNA microarray data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Mfold web server for nucleic acid folding and hybridization prediction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Regulation by transcription attenuation in bacteria: how RNA provides instructions for transcription termination/antitermination decisions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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Regulation of riboflavin biosynthesis and transport genes in bacteria by transcriptional and translational attenuation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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Integration sites for genetic elements in prokaryotic tRNA and tmRNA genes: sublocation preference of integrase subfamilies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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Expression of the Bacillus subtilis trpEDCFBA operon is influenced by translational coupling and Rho termination factor.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
RegulonDB (version 3.0): transcriptional regulation and operon organization in Escherichia coli K-12.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Repression of gene expression by an exogenous sequence element acting in concert with a heterogeneous nuclear ribonucleoprotein-like protein, Nrd1, and the putative helicase Sen1
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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Transcription termination factor rho: the site of bicyclomycin inhibition in Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Bicyclomycin sensitivity and resistance affect Rho factor-mediated transcription termination in the tna operon of Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
6 September 2017
Bicyclomycin and dihydrobicyclomycin inhibition kinetics of Escherichia coli rho-dependent transcription termination factor ATPase activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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Rho-dependent transcription termination in the tryptophanase operon leader region of Escherichia coli K-12.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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Termination factor Rho and its cofactors NusA and NusG silence foreign DNA in E. coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
28 September 2017
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
26 June 2018
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1 reference
stated in
PubMed Central
reference URL
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retrieved
26 June 2018
Termination Factor for RNA Synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
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26 June 2018
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
retrieved
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Systematic mutagenesis of the thymidine tract of the pyrBI attenuator and its effects on intrinsic transcription termination in Escherichia coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2741264
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1 reference
stated in
PubMed Central
reference URL
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retrieved
2 September 2018
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1 reference
stated in
PubMed Central
reference URL
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retrieved
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1 reference
stated in
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reference URL
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retrieved
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1 reference
stated in
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reference URL
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retrieved
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1 reference
stated in
PubMed Central
reference URL
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retrieved
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Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19706412
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Location of the tufB promoter of E. coil: Cotranscription of tufB with four transfer RNA genes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19706412
retrieved
12 December 2020
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Identifiers
DOI
10.1073/PNAS.0903846106
1 reference
stated in
Europe PubMed Central
PMC publication ID
2741264
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
ADS bibcode
2009PNAS..10615406P
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PMC publication ID
2741264
1 reference
stated in
Europe PubMed Central
PMC publication ID
2741264
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
PubMed publication ID
19706412
1 reference
stated in
Europe PubMed Central
PMC publication ID
2741264
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19706412%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
ResearchGate publication ID
26766486
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