(Q37377646)

20 August 2017

Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis (English)

1 reference

Mycobacterium tuberculosis

20 August 2017

0 references

author

Torsten Seemann

27

1 reference

20 August 2017

33

1 reference

20 August 2017

22

Laurence Ma

0 references

Christiane Bouchier

23

Christiane Bouchier

0 references

Claudine Médigue

35

Claudine Médigue

0 references

Valérie Barbe

28

Valérie Barbe

0 references

Sophie Mangenot

3

Sophie Mangenot

0 references

Carine Rouanet

Carine Rouanet

5

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Alessandro Cascioferro

Alessandro Cascioferro

26

0 references

Julien Tap

Julien Tap

9

0 references

Michael Marceau

Michael Marceau

2

0 references

Anne-Sophie Debrie

Anne-Sophie Debrie

18

0 references

Philip Supply

Philip Supply

1

0 references

Roland Brosch

Roland Brosch

38

0 references

Julian Parkhill

Julian Parkhill

36

0 references

Camille Locht

Camille Locht

29

0 references

Michael Andrew Quail

21

Michael A Quail

1 reference

20 August 2017

34

Sylvain Brisse

1 reference

20 August 2017

32

Stephen D Bentley

1 reference

20 August 2017

12

Mickael Orgeur

1 reference

20 August 2017

37

Stéphane Cruveiller

1 reference

20 August 2017

24

Grégory Salvignol

1 reference

20 August 2017

David Roche

4

1 reference

20 August 2017

Varun Khanna

6

1 reference

20 August 2017

Laleh Majlessi

7

1 reference

20 August 2017

Alexis Criscuolo

8

1 reference

20 August 2017

Alexandre Pawlik

10

1 reference

20 August 2017

Laurence Fiette

11

1 reference

20 August 2017

Michel Fabre

13

1 reference

20 August 2017

Cécile Parmentier

14

1 reference

20 August 2017

Wafa Frigui

15

1 reference

20 August 2017

Roxane Simeone

16

1 reference

20 August 2017

Eva C Boritsch

17

1 reference

20 August 2017

Eve Willery

19

1 reference

20 August 2017

Danielle Walker

20

1 reference

20 August 2017

Fadel Sayes

25

1 reference

20 August 2017

Maria-Cristina Gutierrez

30

1 reference

20 August 2017

Claude Leclerc

31

1 reference

20 August 2017

language of work or name

English

0 references

publication date

6 January 2013

1 reference

20 August 2017

1 reference

20 August 2017

45

1 reference

20 August 2017

2

1 reference

20 August 2017

172-179

1 reference

https://scigraph.springernature.com/pub.10.1038/ng.2517

20 August 2017

0 references

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6 September 2017

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Phagosomal rupture by Mycobacterium tuberculosis results in toxicity and host cell death

6 September 2017

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6 September 2017

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High-resolution phenotypic profiling defines genes essential for mycobacterial growth and cholesterol catabolism

6 September 2017

1 reference

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The impact of recombination on dN/dS within recently emerged bacterial clones

6 September 2017

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Mycobacterium tuberculosis complex mycobacteria as amoeba-resistant organisms

6 September 2017

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Evolution and classification of the CRISPR-Cas systems

6 September 2017

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Rapid pneumococcal evolution in response to clinical interventions

6 September 2017

1 reference

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ESAT-6 secretion-independent impact of ESX-1 genes espF and espG1 on virulence of Mycobacterium tuberculosis

6 September 2017

1 reference

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Trehalose-recycling ABC transporter LpqY-SugA-SugB-SugC is essential for virulence of Mycobacterium tuberculosis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Clinical characteristics of the smooth tubercle bacilli 'Mycobacterium canettii' infection suggest the existence of an environmental reservoir

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Molecular characteristics of "Mycobacterium canettii" the smooth Mycobacterium tuberculosis bacilli

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

6 September 2017

1 reference

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Human T cell epitopes of Mycobacterium tuberculosis are evolutionarily hyperconserved

6 September 2017

1 reference

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The population dynamics and control of tuberculosis

6 September 2017

1 reference

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MicroScope: a platform for microbial genome annotation and comparative genomics

6 September 2017

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Shifting the genomic gold standard for the prokaryotic species definition

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Genomic diversity among drug sensitive and multidrug resistant isolates of Mycobacterium tuberculosis with identical DNA fingerprints

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Pathogenicity in the tubercle bacillus: molecular and evolutionary determinants

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Origin, spread and demography of the Mycobacterium tuberculosis complex

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Detecting the molecular scars of evolution in the Mycobacterium tuberculosis complex by analyzing interrupted coding sequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Genome plasticity of BCG and impact on vaccine efficacy

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

DNA-DNA hybridization values and their relationship to whole-genome sequence similarities

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

6 September 2017

1 reference

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A simple and robust statistical test for detecting the presence of recombination

6 September 2017

1 reference

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Comparisons of dN/dS are time dependent for closely related bacterial genomes

6 September 2017

1 reference

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Application of phylogenetic networks in evolutionary studies

6 September 2017

1 reference

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Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis

6 September 2017

1 reference

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Stable association between strains of Mycobacterium tuberculosis and their human host populations

6 September 2017

1 reference

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6 September 2017

1 reference

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Genetic requirements for mycobacterial survival during infection

6 September 2017

1 reference

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The complete genome sequence of Mycobacterium bovis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Genes required for mycobacterial growth defined by high density mutagenesis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Fast algorithms for large-scale genome alignment and comparison

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

A new evolutionary scenario for the Mycobacterium tuberculosis complex

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

ARACHNE: a whole-genome shotgun assembler

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

SSAHA: a fast search method for large DNA databases

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Use of a Mycobacterium tuberculosis H37Rv bacterial artificial chromosome library for genome mapping, sequencing, and comparative genomics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

A novel pathogenic taxon of the Mycobacterium tuberculosis complex, Canetti: characterization of an exceptional isolate from Africa

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Two-laboratory collaborative study on identification of mycobacteria: molecular versus phenotypic methods.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

A codon-based model of nucleotide substitution for protein-coding DNA sequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

The evolutionary advantage of recombination

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

The neighbor-joining method: a new method for reconstructing phylogenetic trees

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Analyzing the mosaic structure of genes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Induction of cell death after localization to the host cell mitochondria by the Mycobacterium tuberculosis PE_PGRS33 protein

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

High genetic diversity revealed by variable-number tandem repeat genotyping and analysis of hsp65 gene polymorphism in a large collection of "Mycobacterium canettii" strains indicates that the M. tuberculosis complex is a recently emerged clone of "

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

The heparin-binding haemagglutinin of M. tuberculosis is required for extrapulmonary dissemination.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Mycobacterial Biofilms Facilitate Horizontal DNA Transfer between Strains ofMycobacterium smegmatis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

A program for calculating and displaying compatibility matrices as an aid in determining reticulate evolution in molecular sequences.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

A multistage tuberculosis vaccine that confers efficient protection before and after exposure.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Influence of ESAT-6 secretion system 1 (RD1) of Mycobacterium tuberculosis on the interaction between mycobacteria and the host immune system

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

Linkage disequilibrium between minisatellite loci supports clonal evolution of Mycobacterium tuberculosis in a high tuberculosis incidence area

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856870

High-throughput gene mapping in Caenorhabditis elegans

2 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNG.2517

Myths and misconceptions: the origin and evolution of Mycobacterium tuberculosis

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNG.2517

A glycolipid of hypervirulent tuberculosis strains that inhibits the innate immune response

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNG.2517

Innate immune recognition and control of adaptive immune responses

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23291586

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Contribution of horizontally acquired genomic islands to the evolution of the tubercle bacilli

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23291586

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The rise and fall of the Mycobacterium tuberculosis genome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23291586

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NG.2517

1 reference

20 August 2017

1 reference

20 August 2017

PubMed publication ID

23291586

1 reference