(Q37392505)

20 August 2017

1 reference

title

The role of 3'-5' exoribonucleases in RNA degradation (English)

1 reference

20 August 2017

Inês J Silva

3

0 references

José Marques Andrade

José M Andrade

1

0 references

Susana Domingues

Susana Domingues

4

0 references

Vânia Pobre

Vânia Pobre

2

0 references

Cecília Maria Arraiano

Cecília M Arraiano

5

0 references

publication date

1 January 2009

1 reference

Progress in Molecular Biology and Translational Science

20 August 2017

published in

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20 August 2017

volume

85

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20 August 2017

page(s)

187-229

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Degradation of mRNA in bacteria: emergence of ubiquitous features

20 August 2017

cites work

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Post-transcriptional control of gene expression: effectors of mRNA decay

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Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12.

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7 January 2021

Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays

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7 January 2021

Differential mRNA stability controls relative gene expression within a polycistronic operon

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7 January 2021

Degradation of RNA in bacteria: comparison of mRNA and stable RNA

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7 January 2021

RNA quality control: degradation of defective transfer RNA

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7 January 2021

Quality control of ribosomal RNA mediated by polynucleotide phosphorylase and RNase R

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7 January 2021

Action of RNase II and polynucleotide phosphorylase against RNAs containing stem-loops of defined structure

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7 January 2021

Ribonuclease E is a 5'-end-dependent endonuclease

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7 January 2021

Initiation of RNA decay in Escherichia coli by 5' pyrophosphate removal

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7 January 2021

The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal.

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7 January 2021

Polyadenylylation destabilizes the rpsO mRNA of Escherichia coli

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7 January 2021

Polyadenylylation helps regulate mRNA decay in Escherichia coli.

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7 January 2021

RNase R degrades non-stop mRNAs selectively in an SmpB-tmRNA-dependent manner.

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7 January 2021

The poly(A) binding protein Hfq protects RNA from RNase E and exoribonucleolytic degradation

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7 January 2021

Inactivation of the decay pathway initiated at an internal site by RNase E promotes poly(A)-dependent degradation of the rpsO mRNA in Escherichia coli.

1 reference

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7 January 2021

RNase R affects gene expression in stationary phase: regulation of ompA.

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7 January 2021

Exoribonuclease superfamilies: structural analysis and phylogenetic distribution

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7 January 2021

RNA-quality control by the exosome

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7 January 2021

The exosome and the proteasome: nano-compartments for degradation

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7 January 2021

Comparative genomics and evolution of proteins involved in RNA metabolism

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7 January 2021

5'-to-3' exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA

1 reference

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7 January 2021

Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E.

1 reference

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7 January 2021

Translation initiation factor a/eIF2(-gamma) counteracts 5' to 3' mRNA decay in the archaeon Sulfolobus solfataricus

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Comparative sequence analysis of ribonucleases HII, III, II PH and D

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Unravelling the dynamics of RNA degradation by ribonuclease II and its RNA-bound complex.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Structural basis for processivity and single-strand specificity of RNase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Structure of the active subunit of the yeast exosome core, Rrp44: diverse modes of substrate recruitment in the RNase II nuclease family

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Drosophila gene tazman, an orthologue of the yeast exosome component Rrp44p/Dis3, is differentially expressed during development.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Information available at cut rates: structure and mechanism of ribonucleases

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Cloning, purification, crystallization and preliminary X-ray crystallographic analysis of XC847, a 3'-5' oligoribonuclease from Xanthomonas campestris

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Pfam: clans, web tools and services

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Enzymatic basis for hydrolytic versus phosphorolytic mRNA degradation in Escherichia coli and Bacillus subtilis

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Purification and characterization of the Escherichia coli exoribonuclease RNase R. Comparison with RNase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Repetitive extragenic palindromic sequences, mRNA stability and gene expression: evolution by gene conversion? A review

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Degradation of stable RNA in bacteria

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The poly(A) tail of mRNAs: bodyguard in eukaryotes, scavenger in bacteria

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RhlB helicase rather than enolase is the beta-subunit of the Escherichia coli polynucleotide phosphorylase (PNPase)-exoribonucleolytic complex

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNA degradation by the exosome is promoted by a nuclear polyadenylation complex

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

A new yeast poly(A) polymerase complex involved in RNA quality control

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

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7 January 2021

DEAD-box RNA helicases in Escherichia coli

1 reference

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7 January 2021

Doughnuts dealing with RNA

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7 January 2021

Substitution of the 3' terminal adenosine residue of transfer RNA in vivo

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7 January 2021

Conserved domains in polynucleotide phosphorylase among eubacteria.

1 reference

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7 January 2021

Enzymatic synthesis of nucleic acidlike polynucleotides

1 reference

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7 January 2021

Expression of the rpsO and pnp genes: structural analysis of a DNA fragment carrying their control regions

1 reference

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7 January 2021

The first step in the functional inactivation of the Escherichia coli polynucleotide phosphorylase messenger is a ribonuclease III processing at the 5' end.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase of Escherichia coli induces the degradation of its RNase III processed messenger by preventing its translation

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

PNPase autocontrols its expression by degrading a double-stranded structure in the pnp mRNA leader

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

PNPase modulates RNase II expression in Escherichia coli: implications for mRNA decay and cell metabolism

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The vacB gene required for virulence in Shigella flexneri and Escherichia coli encodes the exoribonuclease RNase R.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase is necessary for competence development in Bacillus subtilis

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase of Escherichia coli is required for the establishment of bacteriophage P4 immunity

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Transcriptional and post-transcriptional control of polynucleotide phosphorylase during cold acclimation in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Induction of proteins in response to low temperature in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Cold-temperature induction of Escherichia coli polynucleotide phosphorylase occurs by reversal of its autoregulation

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Increased expression of Escherichia coli polynucleotide phosphorylase at low temperatures is linked to a decrease in the efficiency of autocontrol

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polyadenylation of Escherichia coli transcripts plays an integral role in regulating intracellular levels of polynucleotide phosphorylase and RNase E

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Kinetics of Polymerization and Phosphorolysis Reactions of Escherichia coli Polynucleotide Phosphorylase. Evidence for Multiple Binding of Polynucleotide in Phosphorolysis

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Mechanism of polynucleotide phosphorylase

1 reference

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7 January 2021

ENZYMATIC SYNTHESIS OF NUCLEIC ACIDS.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase functions both as a 3' right-arrow 5' exonuclease and a poly(A) polymerase in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Regulation of Escherichia coli polynucleotide phosphorylase by ATP.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase and the archaeal exosome as poly(A)-polymerases

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The majority of Escherichia coli mRNAs undergo post-transcriptional modification in exponentially growing cells

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase functions as both an exonuclease and a poly(A) polymerase in spinach chloroplasts

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNA polyadenylation and degradation in cyanobacteria are similar to the chloroplast but different from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The Streptomyces coelicolor polynucleotide phosphorylase homologue, and not the putative poly(A) polymerase, can polyadenylate RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Addition of poly(A) and heteropolymeric 3' ends in Bacillus subtilis wild-type and polynucleotide phosphorylase-deficient strains

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNA polyadenylation in Archaea: not observed in Haloferax while the exosome polynucleotidylates RNA in Sulfolobus

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Genomic analysis in Escherichia coli demonstrates differential roles for polynucleotide phosphorylase and RNase II in mRNA abundance and decay

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

A DEAD-box RNA helicase in the Escherichia coli RNA degradosome

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

An important role for RNase R in mRNA decay

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNA degradation in Escherichia coli regulated by 3' adenylation and 5' phosphorylation

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

mRNA degradation. A tale of poly(A) and multiprotein machines.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Copurification of E. coli RNAase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Proteins associated with RNase E in a multicomponent ribonucleolytic complex

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Analysis of the Escherichia coli RNA degradosome composition by a proteomic approach.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Physical and functional interactions among RNase E, polynucleotide phosphorylase and the cold-shock protein, CsdA: evidence for a 'cold shock degradosome'.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

DEAD box RhlB RNA helicase physically associates with exoribonuclease PNPase to degrade double-stranded RNA independent of the degradosome-assembling region of RNase E.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The Sm-like protein Hfq regulates polyadenylation dependent mRNA decay in Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Quaternary Structure of Polynucleotide Phosphorylase from Escherichia coli: Evidence of a Complex between Two Types of Polypeptide Chains

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNA recognition: a family matter?

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The solution structure of the S1 RNA binding domain: a member of an ancient nucleic acid-binding fold

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Function of the conserved S1 and KH domains in polynucleotide phosphorylase

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Mutational analysis of polynucleotide phosphorylase from Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The KH and S1 domains of Escherichia coli polynucleotide phosphorylase are necessary for autoregulation and growth at low temperature.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Genetic analysis of polynucleotide phosphorylase structure and functions

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Domain analysis of the chloroplast polynucleotide phosphorylase reveals discrete functions in RNA degradation, polyadenylation, and sequence homology with exosome proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Defining the domains of human polynucleotide phosphorylase (hPNPaseOLD-35) mediating cellular senescence

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The role of the S1 domain in exoribonucleolytic activity: substrate specificity and multimerization

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Structural characterization of the RNase E S1 domain and identification of its oligonucleotide-binding and dimerization interfaces

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The psychrotrophic bacterium Yersinia enterocolitica requires expression of pnp, the gene for polynucleotide phosphorylase, for growth at low temperature (5 degrees C).

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

A novel mutation in the KH domain of polynucleotide phosphorylase affects autoregulation and mRNA decay in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase is a global regulator of virulence and persistency in Salmonella enterica.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Modulation of yersinia type three secretion system by the S1 domain of polynucleotide phosphorylase

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase independently controls virulence factor expression levels and export in Yersinia spp.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Running rings around RNA: a superfamily of phosphate-dependent RNases.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The archaeal exosome core is a hexameric ring structure with three catalytic subunits

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNA channelling by the archaeal exosome

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Reconstitution, activities, and structure of the eukaryotic RNA exosome

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

A single subunit, Dis3, is essentially responsible for yeast exosome core activity

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNase II structure completes group portrait of 3' exoribonucleases

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Decay of mRNAs targeted by RISC requires XRN1, the Ski complex, and the exosome

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Precise physical mapping of theEscherichia coli rnb gene, encoding ribonuclease II

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

DNA sequencing and expression of the gene rnb encoding Escherichia coli ribonuclease II.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Escherichia coli RNase II: characterization of the promoters involved in the transcription of rnb.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The role of endonucleases in the expression of ribonuclease II in Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNase II levels change according to the growth conditions: characterization of gmr, a new Escherichia coli gene involved in the modulation of RNase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The processive reaction mechanism of ribonuclease II.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNase II removes the oligo(A) tails that destabilize the rpsO mRNA of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase, RNase II and RNase E play different roles in the in vivo modulation of polyadenylation in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Roles of RNase E, RNase II and PNPase in the degradation of the rpsO transcripts of Escherichia coli: stabilizing function of RNase II and evidence for efficient degradation in an ams pnp rnb mutant.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Decay of the IS10 antisense RNA by 3' exoribonucleases: evidence that RNase II stabilizes RNA-OUT against PNPase attack.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Overexpression, purification, and properties of Escherichia coli ribonuclease II

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Fate of mRNA extremities generated by intrinsic termination: detailed analysis of reactions catalyzed by ribonuclease II and poly(A) polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The reaction mechanism of ribonuclease II and its interaction with nucleic acid secondary structures

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Amplification of ribonuclease II(mb) activity inEscherichia coliK-12

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

A single mutation in Escherichia coli ribonuclease II inactivates the enzyme without affecting RNA binding

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Characterization of the functional domains of Escherichia coli RNase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Characterizing ribonucleases in vitro examples of synergies between biochemical and structural analysis.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

New Insights into the Mechanism of RNA Degradation by Ribonuclease II

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Architecture of the yeast Rrp44 exosome complex suggests routes of RNA recruitment for 3' end processing

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNR1, a 3'-5' exoribonuclease belonging to the RNR superfamily, catalyzes 3' maturation of chloroplast ribosomal RNAs in Arabidopsis thaliana.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Ribonuclease activity of Dis3 is required for mitotic progression and provides a possible link between heterochromatin and kinetochore function

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Cold shock induction of RNase R and its role in the maturation of the quality control mediator SsrA/tmRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Participation of 3'-to-5' exoribonucleases in the turnover of Bacillus subtilis mRNA

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Substrate recognition and catalysis by the exoribonuclease RNase R.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The role of endoribonucleases in the regulation of RNase R.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Exoribonuclease R in Pseudomonas syringae is essential for growth at low temperature and plays a novel role in the 3' end processing of 16 and 5 S ribosomal RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Exoribonuclease R in Mycoplasma genitalium can carry out both RNA processing and degradative functions and is sensitive to RNA ribose methylation.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The exosome subunit Rrp44 plays a direct role in RNA substrate recognition

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Protein factors associated with the SsrA.SmpB tagging and ribosome rescue complex

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Quality control of bacterial mRNA decoding and decay

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The SsrA-SmpB system for protein tagging, directed degradation and ribosome rescue

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Cell cycle-regulated degradation of tmRNA is controlled by RNase R and SmpB.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The stationary phase of the bacterial life cycle

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Interplay of global regulators and cell physiology in the general stress response of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Adaptation of gene expression in stationary phase bacteria

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Stationary phase-specific mRNAs in Escherichia coli are polyadenylated

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Coping with our cold planet

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Selective expression of the beta-subunit of nucleoid-associated protein HU during cold shock in Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Changes in Escherichia coli transcriptome during acclimatization at low temperature.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Complementation analysis of the cold-sensitive phenotype of the Escherichia coli csdA deletion strain

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Exoribonuclease R interacts with endoribonuclease E and an RNA helicase in the psychrotrophic bacterium Pseudomonas syringae Lz4W.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

BrucellaStationary-Phase Gene Expression and Virulence

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

CodY, a global regulator of stationary phase and virulence in Gram-positive bacteria

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Modulation of stress and virulence in Listeria monocytogenes

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

vacB, a novel chromosomal gene required for expression of virulence genes on the large plasmid of Shigella flexneri

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Cold shock exoribonuclease R (VacB) is involved in Aeromonas hydrophila pathogenesis

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The role of the vacB gene in the pathogenesis of Brucella abortus

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Oligoribonuclease is an essential component of the mRNA decay pathway

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Hydrolysis of oligoribonucleotides by an enzyme fraction from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Oligoribonuclease is distinct from the other known exoribonucleases of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The human homolog of Escherichia coli Orn degrades small single-stranded RNA and DNA oligomers

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Oligoribonuclease is a common downstream target of lithium-induced pAp accumulation in Escherichia coli and human cells

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The crystal structure of XC847 from Xanthomonas campestris: a 3'-5' oligoribonuclease of DnaQ fold family with a novel opposingly shifted helix

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Purification and crystallization of Escherichia coli oligoribonuclease

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Stabilization of discrete mRNA breakdown products in ams pnp rnb multiple mutants of Escherichia coli K-12

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Messenger RNA stability and its role in control of gene expression in bacteria and phages

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Cloning and physical analysis of the pyrF gene (coding for orotidine-5'-phosphate decarboxylase) from Escherichia coli K-12

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Studies on the structure and expression of Escherichia coli pyrC, pyrD and pyrF using the cloned genes

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Analysis of the in vivo decay of the Escherichia coli dicistronic pyrF-orfF transcript: evidence for multiple degradation pathways

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Identification of endonucleolytic cleavage sites involved in decay of Escherichia coli trxA mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Analysis of the function of Escherichia coli poly(A) polymerase I in RNA metabolism

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Initiation, attenuation and RNase III processing of transcripts from the Escherichia coli operon encoding ribosomal protein S15 and polynucleotide phosphorylase

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Decay of mRNA encoding ribosomal protein S15 of Escherichia coli is initiated by an RNase E-dependent endonucleolytic cleavage that removes the 3' stabilizing stem and loop structure

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Polynucleotide phosphorylase is required for the rapid degradation of the RNase E-processed rpsO mRNA of Escherichia coli devoid of its 3' hairpin.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The rpsO mRNA of Escherichia coli is polyadenylated at multiple sites resulting from endonucleolytic processing and exonucleolytic degradation.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

E. coli RpsO mRNA decay: RNase E processing at the beginning of the coding sequence stimulates poly(A)-dependent degradation of the mRNA

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Surprises at the 3' end of prokaryotic RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Differential sensitivities of portions of the mRNA for ribosomal protein S20 to 3'-exonucleases dependent on oligoadenylation and RNA secondary structure.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Reconstitution of the degradation of the mRNA for ribosomal protein S20 with purified enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Specific endonucleolytic cleavage of the mRNA for ribosomal protein S20 of Escherichia coli requires the product of the ams gene in vivo and in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The RNA degradosome and poly(A) polymerase of Escherichia coli are required in vivo for the degradation of small mRNA decay intermediates containing REP-stabilizers.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3' exonuclease and a DEAD-box RNA helicase

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Decay of mRNA in Escherichia coli: investigation of the fate of specific segments of transcripts

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Growth-rate dependent regulation of mRNA stability in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

A 5'-terminal stem-loop structure can stabilize mRNA in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Site-specific endonucleolytic cleavages and the regulation of stability of E. coli ompA mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Regulation of ompA mRNA stability: the role of a small regulatory RNA in growth phase-dependent control.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Controlling mRNA stability and translation with small, noncoding RNAs

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Regulating the regulators: How ribonucleases dictate the rules in the control of small non-coding RNAs

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Modulating the outer membrane with small RNAs

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

PNPase is a key player in the regulation of small RNAs that control the expression of outer membrane proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Characterization of the role of ribonucleases in Salmonella small RNA decay

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

RNAs involved in copy-number control and incompatibility of plasmid R1

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Regulation of plasmid R1 replication: PcnB and RNase E expedite the decay of the antisense RNA, CopA

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Plasmid ColE1 incompatibility determined by interaction of RNA I with primer transcript

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The rate of processing and degradation of antisense RNAI regulates the replication of ColE1-type plasmids in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

The Escherichia coli pcnB gene promotes adenylylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Absence of RNASE III alters the pathway by which RNAI, the antisense inhibitor of ColE1 replication, decays

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Control of ColE2 plasmid replication: regulation of Rep expression by a plasmid-coded antisense RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Replication initiator protein mRNA of ColE2 plasmid and its antisense regulator RNA are under the control of different degradation pathways

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

Crystal structure of Escherichia coli PNPase: Central channel residues are involved in processive RNA degradation

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2900805-2

7 January 2021

10.1016/S0079-6603(08)00805-2

Identifiers

DOI

1 reference

release_poinx4epufcn3mvuvz3orzi6ya

20 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/poinx4epufcn3mvuvz3orzi6ya

24 November 2022

mapped directly with Wikidata item

1 reference