(Q37468635)

20 August 2017

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title

Functional genomics using RIKEN Arabidopsis thaliana full-length cDNAs (English)

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20 August 2017

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Motoaki Seki

1

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Kazuo Shinozaki

object named as

Kazuo Shinozaki

series ordinal

2

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publication date

2 May 2009

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Journal of Plant Research

20 August 2017

published in

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20 August 2017

volume

122

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20 August 2017

issue

4

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20 August 2017

page(s)

355-366

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AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors

20 August 2017

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Comparative genomics of Physcomitrella patens gametophytic transcriptome and Arabidopsis thaliana: implication for land plant evolution

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Identification of stress-tolerance-related transcription-factor genes via mini-scale Full-length cDNA Over-eXpressor (FOX) gene hunting system

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Tiling array-driven elucidation of transcriptional structures based on maximum-likelihood and Markov models

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Solution structure of an Arabidopsis WRKY DNA binding domain

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12 December 2020

Construction of a full-length cDNA library from young spikelets of hexaploid wheat and its characterization by large-scale sequencing of expressed sequence tags

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12 December 2020

An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure.

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12 December 2020

Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes

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12 December 2020

High-efficiency cloning of Arabidopsis full-length cDNA by biotinylated CAP trapper

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12 December 2020

A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway

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12 December 2020

Two different novel cis-acting elements of erd1, a clpA homologous Arabidopsis gene function in induction by dehydration stress and dark-induced senescence

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12 December 2020

High efficiency selection of full-length cDNA by improved biotinylated cap trapper.

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12 December 2020

Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis

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12 December 2020

Characterization of expressed sequence tags from a full-length enriched cDNA library of Cryptomeria japonica male strobili

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12 December 2020

A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis)

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12 December 2020

High-efficiency full-length cDNA cloning by biotinylated CAP trapper

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12 December 2020

Genome-scale, biochemical annotation method based on the wheat germ cell-free protein synthesis system

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12 December 2020

Solution structure of the major DNA-binding domain of Arabidopsis thaliana ethylene-insensitive3-like3.

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12 December 2020

Identification and analysis of Arabidopsis expressed sequence tags characteristic of non-coding RNAs

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12 December 2020

Monitoring the expression pattern of around 7,000 Arabidopsis genes under ABA treatments using a full-length cDNA microarray

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12 December 2020

RIKEN Arabidopsis full-length (RAFL) cDNA and its applications for expression profiling under abiotic stress conditions

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12 December 2020

Systematic approaches to using the FOX hunting system to identify useful rice genes

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12 December 2020

Advances in cereal functional genomics

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12 December 2020

PLANT COLD ACCLIMATION: Freezing Tolerance Genes and Regulatory Mechanisms

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12 December 2020

Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana

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12 December 2020

RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome

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12 December 2020

Salt and drought stress signal transduction in plants

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12 December 2020

Further progress towards a catalogue of all Arabidopsis genes: analysis of a set of 5000 non-redundant ESTs.

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12 December 2020

Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript

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12 December 2020

A single amino acid insertion in the WRKY domain of the Arabidopsis TIR-NBS-LRR-WRKY-type disease resistance protein SLH1 (sensitive to low humidity 1) causes activation of defense responses and hypersensitive cell death

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12 December 2020

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12 December 2020

Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems

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12 December 2020

Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray

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12 December 2020

Drought tolerance established by enhanced expression of the CC-NBS-LRR gene, ADR1, requires salicylic acid, EDS1 and ABI1.

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12 December 2020

ACTCAT, a novel cis-acting element for proline- and hypoosmolarity-responsive expression of the ProDH gene encoding proline dehydrogenase in Arabidopsis.

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12 December 2020

Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice

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12 December 2020

Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signaling pathways

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12 December 2020

Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array

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12 December 2020

Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation

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12 December 2020

Sequencing analysis of 20,000 full-length cDNA clones from cassava reveals lineage specific expansions in gene families related to stress response.

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12 December 2020

Full-length messenger RNA sequences greatly improve genome annotation

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12 December 2020

Arabidopsis thaliana: a model plant for genome analysis.

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12 December 2020

Toxicity of free proline revealed in an arabidopsis T-DNA-tagged mutant deficient in proline dehydrogenase

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12 December 2020

Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses

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12 December 2020

The map-based sequence of the rice genome

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12 December 2020

A genome-wide gain-of function analysis of rice genes using the FOX-hunting system

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12 December 2020

Identification of Arabidopsis genes regulated by high light-stress using cDNA microarray

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12 December 2020

Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters

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12 December 2020

Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila

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12 December 2020

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

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12 December 2020

Functional annotation of a full-length Arabidopsis cDNA collection

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12 December 2020

Whole genome sequence comparisons and "full-length" cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation

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12 December 2020

Monitoring expression profiles of Arabidopsis genes during cold acclimation and deacclimation using DNA microarrays

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12 December 2020

Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter

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12 December 2020

A cell-free protein synthesis system for high-throughput proteomics

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12 December 2020

A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors

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12 December 2020

Arabidopsis genomic information for interpreting wheat EST sequences

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12 December 2020

A new set of Arabidopsis expressed sequence tags from developing seeds. The metabolic pathway from carbohydrates to seed oil.

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12 December 2020

Development of 5006 full-length CDNAs in barley: a tool for accessing cereal genomics resources

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12 December 2020

Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance

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12 December 2020

RNA maps reveal new RNA classes and a possible function for pervasive transcription

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12 December 2020

Empirical analysis of transcriptional activity in the Arabidopsis genome

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12 December 2020

Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs)

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12 December 2020

AREB1 is a transcription activator of novel ABRE-dependent ABA signaling that enhances drought stress tolerance in Arabidopsis

1 reference

12 December 2020

Efficient and high-throughput vector construction and Agrobacterium-mediated transformation of Arabidopsis thaliana suspension-cultured cells for functional genomics

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12 December 2020

Functional annotation of 19,841 Populus nigra full-length enriched cDNA clones

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12 December 2020

Genomewide comparative analysis of alternative splicing in plants

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12 December 2020

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

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12 December 2020

Monitoring expression profiles of Arabidopsis gene expression during rehydration process after dehydration using ca 7000 full-length cDNA microarray

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12 December 2020

Genes galore: a summary of methods for accessing results from large-scale partial sequencing of anonymous Arabidopsis cDNA clones

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12 December 2020

Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) function as transcriptional activators in abscisic acid signaling

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12 December 2020

A large scale analysis of cDNA in Arabidopsis thaliana: generation of 12,028 non-redundant expressed sequence tags from normalized and size-selected cDNA libraries

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12 December 2020

Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences

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12 December 2020

Overexpression of Arabidopsis response regulators, ARR4/ATRR1/IBC7 and ARR8/ATRR3, alters cytokinin responses differentially in the shoot and in callus formation.

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12 December 2020

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

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12 December 2020

Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought-responsive gene expression

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12 December 2020

Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Arabidopsis.

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12 December 2020

The FOX hunting system: an alternative gain-of-function gene hunting technique

1 reference

12 December 2020

Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1

1 reference

12 December 2020

OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and cold-responsive gene expression.

1 reference

12 December 2020

An inventory of 1152 expressed sequence tags obtained by partial sequencing of cDNAs from Arabidopsis thaliana

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12 December 2020

Genome sequencing in microfabricated high-density picolitre reactors

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12 December 2020

Sequencing of natural strains of Arabidopsis thaliana with short reads

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12 December 2020

Plant cis-acting regulatory DNA elements (PLACE) database: 1999

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12 December 2020

Leucine-rich repeat receptor-like kinase1 is a key membrane-bound regulator of abscisic acid early signaling in Arabidopsis

1 reference

12 December 2020

Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses by using a full-length cDNA microarray

1 reference

12 December 2020

A simple and high-sensitivity method for analysis of ubiquitination and polyubiquitination based on wheat cell-free protein synthesis

1 reference

12 December 2020

A highly efficient and robust cell-free protein synthesis system prepared from wheat embryos: plants apparently contain a suicide system directed at ribosomes

1 reference

12 December 2020

The cDNA microarray analysis using an Arabidopsis pad3 mutant reveals the expression profiles and classification of genes induced by Alternaria brassicicola attack

1 reference

12 December 2020

Sequencing and analysis of approximately 40,000 soybean cDNA clones from a full-length-enriched cDNA library.

1 reference

12 December 2020

Analysis of multiple occurrences of alternative splicing events in Arabidopsis thaliana using novel sequenced full-length cDNAs

1 reference

12 December 2020

PLANT CELLULAR AND MOLECULAR RESPONSES TO HIGH SALINITY.

1 reference

12 December 2020

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

1 reference

12 December 2020

10.1007/S10265-009-0239-3

Identifiers

DOI

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20 August 2017

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