(Q37485128)

English

Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7

scientific article published on 10 January 2014

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scholarly article

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4 March 2020

Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7 (English)

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4 March 2020

Escherichia coli

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comparative genomics

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based on heuristic

inferred from title

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4 March 2020

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4 March 2020

Patrick S Chain

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4 March 2020

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Steven Huynh

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4 March 2020

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Kerry K Cooper

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4 March 2020

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Robert E Mandrell

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4 March 2020

Jacqueline W Louie

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4 March 2020

Jonas Korlach

4

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4 March 2020

Sanaa Ahmed

9

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4 March 2020

Michelle Qiu Carter

10

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10 January 2014

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4 March 2020

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4 March 2020

15

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4 March 2020

17

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4 March 2020

Multistate outbreak of Escherichia coli O145 infections associated with romaine lettuce consumption, 2010.

1 reference

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23 August 2017

Increased recognition of non-O157 Shiga toxin-producing Escherichia coli infections in the United States during 2000-2010: epidemiologic features and comparison with E. coli O157 infections

1 reference

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Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing

1 reference

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23 August 2017

Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2

1 reference

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23 August 2017

The methylomes of six bacteria

1 reference

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23 August 2017

Association of nucleotide polymorphisms within the O-antigen gene cluster of Escherichia coli O26, O45, O103, O111, O121, and O145 with serogroups and genetic subtypes

1 reference

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23 August 2017

Hybrid error correction and de novo assembly of single-molecule sequencing reads

1 reference

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23 August 2017

Contribution of urease to colonization by Shiga toxin-producing Escherichia coli

1 reference

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23 August 2017

Foodborne Diseases Active Surveillance Network (FoodNet) in 2012: a foundation for food safety in the United States

1 reference

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23 August 2017

A novel Escherichia coli O157:H7 clone causing a major hemolytic uremic syndrome outbreak in China

1 reference

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23 August 2017

Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data

1 reference

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23 August 2017

Need for long-term follow-up in enterohemorrhagic Escherichia coli-associated hemolytic uremic syndrome due to late-emerging sequelae

1 reference

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23 August 2017

Escherichia coli serotype O55:H7 diversity supports parallel acquisition of bacteriophage at Shiga toxin phage insertion sites during evolution of the O157:H7 lineage

1 reference

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23 August 2017

Evolutionary silence of the acid chaperone protein HdeB in enterohemorrhagic Escherichia coli O157:H7.

1 reference

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23 August 2017

Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing

1 reference

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23 August 2017

Genomic anatomy of Escherichia coli O157:H7 outbreaks

1 reference

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23 August 2017

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

1 reference

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23 August 2017

Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany

1 reference

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23 August 2017

Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4

1 reference

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23 August 2017

PHAST: a fast phage search tool

1 reference

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23 August 2017

Prevalence, distribution and evolutionary significance of the IS629 insertion element in the stepwise emergence of Escherichia coli O157:H7

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

23 August 2017

Enteropathogenic and enterohaemorrhagic Escherichia coli: even more subversive elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

23 August 2017

Virulence profiling and quantification of verocytotoxin-producing Escherichia coli O145:H28 and O26:H11 isolated during an ice cream-related hemolytic uremic syndrome outbreak

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

23 August 2017

progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

1 reference

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23 August 2017

Direct detection of DNA methylation during single-molecule, real-time sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

23 August 2017

A brief overview of Escherichia coli O157:H7 and its plasmid O157.

1 reference

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23 August 2017

Pathogenomics of the virulence plasmids of Escherichia coli.

1 reference

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23 August 2017

Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

23 August 2017

Genomic diversity of pathogenic Escherichia coli of the EHEC 2 clonal complex

1 reference

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23 August 2017

Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

23 August 2017

Genomic instability in regions adjacent to a highly conserved pch prophage in Escherichia coli O157:H7 generates diversity in expression patterns of the LEE pathogenicity island

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

23 August 2017

Outbreak of verocytotoxin-producing E. coli O145 and O26 infections associated with the consumption of ice cream produced at a farm, Belgium, 2007.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

23 August 2017

Variation in virulence among clades of Escherichia coli O157:H7 associated with disease outbreaks

1 reference

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23 August 2017

The RAST Server: rapid annotations using subsystems technology

1 reference

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23 August 2017

Genetic diversity among clonal lineages within Escherichia coli O157:H7 stepwise evolutionary model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

23 August 2017

MobilomeFINDER: web-based tools for in silico and experimental discovery of bacterial genomic islands

1 reference

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23 August 2017

The emerging clinical importance of non-O157 Shiga toxin-producing Escherichia coli

1 reference

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23 August 2017

Epigenetic gene regulation in the bacterial world

1 reference

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23 August 2017

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

1 reference

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23 August 2017

Identification of four fimbria-encoding genomic islands that are highly specific for verocytotoxin-producing Escherichia coli serotype O157 strains

1 reference

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23 August 2017

ACT: the Artemis Comparison Tool

1 reference

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23 August 2017

Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7.

1 reference

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23 August 2017

ProtTest: selection of best-fit models of protein evolution

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23 August 2017

Association of genomic O island 122 of Escherichia coli EDL 933 with verocytotoxin-producing Escherichia coli seropathotypes that are linked to epidemic and/or serious disease

1 reference

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23 August 2017

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

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23 August 2017

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

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23 August 2017

Dam- and OxyR-dependent phase variation of agn43: essential elements and evidence for a new role of DNA methylation

1 reference

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23 August 2017

Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

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23 August 2017

Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics

1 reference

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23 August 2017

Food-related illness and death in the United States

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23 August 2017

Alignment of whole genomes

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23 August 2017

Diarrheagenic Escherichia coli

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23 August 2017

Evolutionary relationships among pathogenic and nonpathogenic Escherichia coli strains inferred from multilocus enzyme electrophoresis and mdh sequence studies

1 reference

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23 August 2017

Enteropathogenic Escherichia coli contains a putative type III secretion system necessary for the export of proteins involved in attaching and effacing lesion formation

1 reference

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23 August 2017

Escherichia coli that cause diarrhea: enterotoxigenic, enteropathogenic, enteroinvasive, enterohemorrhagic, and enteroadherent

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23 August 2017

Non-O157 Shiga toxin-producing Escherichia coli in foods

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6 September 2017

LEEways: tales of EPEC, ATEC and EHEC.

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6 September 2017

Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing

1 reference

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26 June 2018

Characterization of Isolates from an outbreak of multidrug-resistant, Shiga toxin-producing Escherichia coli O145 in the United States

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3893438

26 June 2018

The evolution of virulence in non-o157 shiga toxin-producing Escherichia coli

1 reference

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26 June 2018

Different IS629 transposition frequencies exhibited by Escherichia coli O157:H7 strains in the stepwise evolutionary model

1 reference

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26 June 2018

Dam methyltransferase is required for stable lysogeny of the Shiga toxin (Stx2)-encoding bacteriophage 933W of enterohemorrhagic Escherichia coli O157:H7

1 reference

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26 June 2018

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

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26 June 2018

Detection of the top six non-O157 Shiga toxin-producing Escherichia coli O groups by ELISA.

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2 September 2018

Annual cost of illness and quality-adjusted life year losses in the United States due to 14 foodborne pathogens.

1 reference

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2 September 2018

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1 reference

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2 September 2018

Molecular mechanisms of Escherichia coli pathogenicity

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2 September 2018

Dam methylation controls O-antigen chain length in Salmonella enterica serovar enteritidis by regulating the expression of Wzz protein

1 reference

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2 September 2018

Non-O157 Shiga toxin-producing Escherichia coli infections in the United States, 1983-2002.

1 reference

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2 September 2018

Parallel evolution of virulence in pathogenic Escherichia coli.

1 reference

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2 September 2018

Methylation patterns in pap regulatory DNA control pyelonephritis-associated pili phase variation in E. coli.

1 reference

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2 September 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-17

21 January 2018

Prophage Finder: a prophage loci prediction tool for prokaryotic genome sequences

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Diversity within the Campylobacter jejuni type I restriction-modification loci

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-15-17

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24410921%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24410921%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24410921%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

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