(Q37557111)

21 August 2017

Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals (English)

1 reference

21 August 2017

0 references

3

Imad Abugessaisa

1 reference

21 August 2017

Owen Rackham

14

0 references

Anthony Mathelier

Anthony Mathelier

9

0 references

Yulia Medvedeva

Yulia A Medvedeva

10

0 references

Takeya Kasukawa

Takeya Kasukawa

24

0 references

Finn Drabløs

Finn Drabløs

12

0 references

Hiromasa Ono

Hiromasa Ono

19

0 references

Albin Sandelin

Albin Sandelin

17

0 references

Hidemasa U. Bono

Hidemasa Bono

20

0 references

Piero Carninci

Piero Carninci

22

0 references

Christopher J. Mungall

7

Chris Mungall

1 reference

21 August 2017

Yoshihide Hayashizaki

21

Yoshihide Hayashizaki

1 reference

21 August 2017

11

Andreas Lennartsson

1 reference

21 August 2017

16

Robin Andersson

1 reference

21 August 2017

15

Julian Gough

1 reference

21 August 2017

13

Jordan A Ramilowski

1 reference

21 August 2017

1

Marina Lizio

1 reference

21 August 2017

25

Hideya Kawaji

1 reference

21 August 2017

2

Jayson Harshbarger

1 reference

21 August 2017

6

Jessica Severin

1 reference

21 August 2017

5

Atsushi Kondo

1 reference

21 August 2017

23

Alistair R R Forrest

1 reference

21 August 2017

8

David Arenillas

1 reference

21 August 2017

18

Hans Ienasescu

1 reference

21 August 2017

Shuei Noguchi

4

1 reference

21 August 2017

language of work or name

English

0 references

publication date

27 October 2016

1 reference

21 August 2017

Nucleic Acids Research

1 reference

21 August 2017

45

1 reference

21 August 2017

D1

1 reference

21 August 2017

D737-D743

1 reference

Creative Commons Attribution 4.0 International

21 August 2017

start time

4 January 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

FANTOM5 transcriptome catalog of cellular states based on Semantic MediaWiki

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

A predictive computational framework for direct reprogramming between human cell types

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

The UCSC Genome Browser database: 2016 update

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Mouse genome database 2016.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

A draft network of ligand-receptor-mediated multicellular signalling in human

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

The BioMart community portal: an innovative alternative to large, centralized data repositories

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Gateways to the FANTOM5 promoter level mammalian expression atlas

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

A promoter-level mammalian expression atlas

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

An atlas of active enhancers across human cell types and tissues

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

An integrated encyclopedia of DNA elements in the human genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Microattribution and nanopublication as means to incentivize the placement of human genome variation data into the public domain

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Single molecule sequencing with a HeliScope genetic analysis system

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Network visualization and analysis of gene expression data using BioLayout Express(3D).

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

BodyParts3D: 3D structure database for anatomical concepts

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Antisense transcription in the mammalian transcriptome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

The transcriptional landscape of the mammalian genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Cytoscape: a software environment for integrated models of biomolecular interaction networks

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

FANTOM DB: database of Functional Annotation of RIKEN Mouse cDNA Clones.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Functional annotation of a full-length mouse cDNA collection

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

READ: RIKEN Expression Array Database.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

CAGEd-oPOSSUM: motif enrichment analysis from CAGE-derived TSSs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Update of the FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

EpiFactors: a comprehensive database of human epigenetic factors and complexes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

Interactive visualization and analysis of large-scale sequencing datasets using ZENBU.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210666

1 September 2018

Identifiers

DOI

10.1093/NAR/GKW995

1 reference

journals/nar/LizioHANKSMAMML17

21 August 2017

1 reference

DBLP Dataset 2021-01-02

release_5z6fqqnewbbi7a5mwaipsgmi44

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/5z6fqqnewbbi7a5mwaipsgmi44

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

21 August 2017

1 reference