(Q37680341)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

title

The light-induced transcriptome of the zebrafish pineal gland reveals complex regulation of the circadian clockwork by light (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

0 references

0 references

0 references

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Yoav Gothilf

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

author name string

Zohar Ben-Moshe

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Shahar Alon

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Philipp Mracek

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Lior Faigenbloom

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Adi Tovin

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Eli Eisenberg

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Nicholas S Foulkes

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

language of work or name

English

0 references

publication date

13 January 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

volume

42

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

page(s)

3750-3767

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

5 March 2020

copyright license

start time

11 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3973289/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

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Systematic identification of rhythmic genes reveals camk1gb as a new element in the circadian clockwork

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Regulation of per and cry genes reveals a central role for the D-box enhancer in light-dependent gene expression.

23 August 2017

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MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase

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A blind circadian clock in cavefish reveals that opsins mediate peripheral clock photoreception

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Thyrotroph embryonic factor regulates light-induced transcription of repair genes in zebrafish embryonic cells

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Light directs zebrafish period2 expression via conserved D and E boxes

23 August 2017

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23 August 2017

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Transcriptome analysis of the zebrafish pineal gland

23 August 2017

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Structural and functional evolution of the pineal melatonin system in vertebrates

23 August 2017

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

23 August 2017

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RNA-Seq: a revolutionary tool for transcriptomics

23 August 2017

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The nuclear hormone receptor family round the clock.

23 August 2017

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Disturbed clockwork resetting in Sharp-1 and Sharp-2 single and double mutant mice

23 August 2017

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Novel functions for Period 3 and Exo-rhodopsin in rhythmic transcription and melatonin biosynthesis within the zebrafish pineal organ

23 August 2017

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Circadian control by the reduction/oxidation pathway: catalase represses light-dependent clock gene expression in the zebrafish

23 August 2017

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23 August 2017

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A novel E4BP4 element drives circadian expression of mPeriod2.

23 August 2017

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23 August 2017

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23 August 2017

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A genetic screen implicates miRNA-372 and miRNA-373 as oncogenes in testicular germ cell tumors

23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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Hypoxia induces transcription of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase-4 gene via hypoxia-inducible factor-1alpha activation

23 August 2017

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E-box function in a period gene repressed by light

23 August 2017

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Teleost multiple tissue (tmt) opsin: a candidate photopigment regulating the peripheral clocks of zebrafish?

23 August 2017

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

23 August 2017

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Pineal-specific expression of green fluorescent protein under the control of the serotonin-N-acetyltransferase gene regulatory regions in transgenic zebrafish

23 August 2017

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Dec1 and Dec2 are regulators of the mammalian molecular clock

23 August 2017

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E4BP4/NFIL3, a PAR-related bZIP factor with many roles.

23 August 2017

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Bimodal regulation of mPeriod promoters by CREB-dependent signaling and CLOCK/BMAL1 activity

23 August 2017

1 reference

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Circadian rhythms in isolated brain regions.

23 August 2017

1 reference

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Light-induced phase-delay of the chicken pineal circadian clock is associated with the induction of cE4bp4, a potential transcriptional repressor of cPer2 gene

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Circadian photoperception

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Role of DBP in the circadian oscillatory mechanism

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Light-dependent sequestration of TIMELESS by CRYPTOCHROME

23 August 2017

1 reference

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Molecular bases for circadian clocks

23 August 2017

1 reference

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The basic-helix-loop-helix-PAS orphan MOP3 forms transcriptionally active complexes with circadian and hypoxia factors

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Temporal organization: reflections of a Darwinian clock-watcher

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Linking oxygen to time: the bidirectional interaction between the hypoxic signaling pathway and the circadian clock

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Micro-managing the circadian clock: The role of microRNAs in biological timekeeping

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

It's time to swim! Zebrafish and the circadian clock.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Basic protocols for zebrafish cell lines: maintenance and transfection

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Molecular analysis of Dec1 and Dec2 in the peripheral circadian clock of zebrafish photosensitive cells.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Hypoxia affects expression of circadian genes PER1 and CLOCK in mouse brain.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Light acts directly on organs and cells in culture to set the vertebrate circadian clock

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Integration and germ-line transmission of a pseudotyped retroviral vector in zebrafish

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Multiple PAR and E4BP4 bZIP transcription factors in zebrafish: diverse spatial and temporal expression patterns

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Characterizing light-regulated retinal microRNAs reveals rapid turnover as a common property of neuronal microRNAs

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

MicroRNA (miRNA) transcriptome of mouse retina and identification of a sensory organ-specific miRNA cluster

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Spectral sensitivity of melatonin suppression in the zebrafish pineal gland.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Functional development of the zebrafish pineal gland: light-induced expression of period2 is required for onset of the circadian clock

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Cross-talk between hypoxic and circadian pathways: cooperative roles for hypoxia-inducible factor 1alpha and CLOCK in transcriptional activation of the vasopressin gene.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

A model for measurement error for gene expression arrays

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Molecular analysis of zebrafish photolyase/cryptochrome family: two types of cryptochromes present in zebrafish

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Zebrafish serotonin N-acetyltransferase-2: marker for development of pineal photoreceptors and circadian clock function

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3973289

Hypoxia-inducible factor 1: master regulator of O2 homeostasis

1 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24423866

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Circadian rhythmicity in the locomotor activity of larval zebrafish

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24423866

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKT1359

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

PubMed publication ID

24423866

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423866%20AND%20SRC:MED&resulttype=core&format=json