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Illuminating the Transcriptome through the Genome
scientific article published on 14 March 2014
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Europe PubMed Central
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3978521
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13 March 2020
title
Illuminating the Transcriptome through the Genome
(English)
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Europe PubMed Central
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3978521
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24705295%20AND%20SRC:MED&resulttype=core&format=json
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13 March 2020
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transcriptome
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author
David J Elliott
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1
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Europe PubMed Central
PMC publication ID
3978521
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24705295%20AND%20SRC:MED&resulttype=core&format=json
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13 March 2020
author name string
David J Elliott
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Europe PubMed Central
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3978521
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22 August 2017
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English
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publication date
14 March 2014
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3978521
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13 March 2020
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Genes
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13 March 2020
volume
5
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13 March 2020
issue
1
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13 March 2020
page(s)
235-253
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13 March 2020
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14 March 2014
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23 August 2017
An amazing sequence arrangement at the 5' ends of adenovirus 2 messenger RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
23 August 2017
Why genes in pieces?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
23 August 2017
Spliced segments at the 5′ terminus of adenovirus 2 late mRNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
23 August 2017
From single splicing events to thousands: the ambiguous step forward in splicing research
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
6 September 2017
RNA-protein interactions in vivo: global gets specific
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
6 September 2017
Pause locally, splice globally
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
6 September 2017
Understanding splicing regulation through RNA splicing maps
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
6 September 2017
Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
6 September 2017
Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
6 September 2017
A question of size: the eukaryotic proteome and the problems in defining it.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
6 September 2017
Counting on co-transcriptional splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
14 September 2017
Minimal conditions for exonization of intronic sequences: 5' splice site formation in alu exons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
14 September 2017
A slow RNA polymerase II affects alternative splicing in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
14 September 2017
Frequent alternative splicing of human genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
14 September 2017
Finding splice sites within a wilderness of RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
14 September 2017
A role for exon sequences in alternative splicing of the human fibronectin gene
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
14 September 2017
Intronic sequences flanking alternatively spliced exons are conserved between human and mouse
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
28 September 2017
Total RNA sequencing reveals nascent transcription and widespread co-transcriptional splicing in the human brain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
23 June 2018
SFmap: a web server for motif analysis and prediction of splicing factor binding sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
23 June 2018
Minor introns are embedded molecular switches regulated by highly unstable U6atac snRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
1 September 2018
Tissue-specific alternative splicing remodels protein-protein interaction networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
1 September 2018
Tissue-specific alternative splicing of Tak1 is conserved in deuterostomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
1 September 2018
Nucleosome positioning as a determinant of exon recognition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
1 September 2018
Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
1 September 2018
EST comparison indicates 38% of human mRNAs contain possible alternative splice forms.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
1 September 2018
The evolutionary landscape of alternative splicing in vertebrate species
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3978521
retrieved
2 October 2018
Chromatin organization marks exon-intron structure
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.3390%2FGENES5010235
retrieved
21 January 2018
When chromatin meets splicing
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24705295
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Intragenic chromatin modifications: a new layer in alternative splicing regulation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24705295
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
From chromatin to splicing: RNA-processing as a total artwork
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24705295
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A role for exon sequences and splice-site proximity in splice-site selection
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24705295
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.3390/GENES5010235
1 reference
stated in
Europe PubMed Central
PMC publication ID
3978521
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24705295%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
PMC publication ID
3978521
1 reference
stated in
Europe PubMed Central
PMC publication ID
3978521
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24705295%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
PubMed publication ID
24705295
1 reference
stated in
Europe PubMed Central
PMC publication ID
3978521
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24705295%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
ResearchGate publication ID
261408360
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