(Q37855729)

English

Making new out of old: recycling and modification of an ancient protein translocation system during eukaryotic evolution. Mechanistic comparison and phylogenetic analysis of ERAD, SELMA and the peroxisomal importomer

scientific article published on 21 March 2011

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scholarly article

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Europe PubMed Central

PubMed publication ID

24 August 2017

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Europe PubMed Central

Making new out of old: recycling and modification of an ancient protein translocation system during eukaryotic evolution. Mechanistic comparison and phylogenetic analysis of ERAD, SELMA and the peroxisomal importomer (English)

1 reference

Europe PubMed Central

PubMed publication ID

24 August 2017

protein evolution

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1 reference

based on heuristic

inferred from title

Nicole Grünheit

2

object named as

Nicole Gruenheit

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Europe PubMed Central

PubMed publication ID

24 August 2017

author name string

Kathrin Bolte

1

1 reference

Europe PubMed Central

PubMed publication ID

24 August 2017

Gregor Felsner

3

1 reference

Europe PubMed Central

PubMed publication ID

24 August 2017

Maik S Sommer

4

1 reference

Europe PubMed Central

PubMed publication ID

24 August 2017

Uwe-G Maier

5

1 reference

Europe PubMed Central

PubMed publication ID

24 August 2017

Franziska Hempel

6

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Europe PubMed Central

PubMed publication ID

24 August 2017

language of work or name

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publication date

21 March 2011

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Europe PubMed Central

PubMed publication ID

24 August 2017

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Europe PubMed Central

PubMed publication ID

24 August 2017

33

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Europe PubMed Central

PubMed publication ID

24 August 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

24 August 2017

368-376

1 reference

Europe PubMed Central

PubMed publication ID

24 August 2017

Plastid evolution

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

The evolution of protein targeting and translocation systems

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Comparative and evolutionary aspects of macromolecular translocation across membranes

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Protein translocation across the bacterial cytoplasmic membrane.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Protein translocation by the Sec61/SecY channel

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Origin of a chloroplast protein importer

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

The evolutionary origin of the protein-translocating channel of chloroplastic envelope membranes: identification of a cyanobacterial homolog

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Toc, Tic, Tat et al.: structure and function of protein transport machineries in chloroplasts

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Evolution of the molecular machines for protein import into mitochondria

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Structure and evolution of mitochondrial outer membrane proteins of beta-barrel topology

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Protein dislocation from the ER.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

ERAD: the long road to destruction

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

The recognition and retrotranslocation of misfolded proteins from the endoplasmic reticulum

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Origin and evolution of the peroxisomal proteome

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

The evolutionary origin of peroxisomes: an ER-peroxisome connection.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Peroxisome diversity and evolution

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

ERAD components in organisms with complex red plastids suggest recruitment of a preexisting protein transport pathway for the periplastid membrane.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

ERAD-derived preprotein transport across the second outermost plastid membrane of diatoms

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Characterization of two putative protein translocation components in the apicoplast of Plasmodium falciparum

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Der1-mediated preprotein import into the periplastid compartment of chromalveolates?

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

An unusual ERAD-like complex is targeted to the apicoplast of Plasmodium falciparum

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Genetic evidence that an endosymbiont-derived endoplasmic reticulum-associated protein degradation (ERAD) system functions in import of apicoplast proteins

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Distinct ubiquitin-ligase complexes define convergent pathways for the degradation of ER proteins

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Exploration of the topological requirements of ERAD identifies Yos9p as a lectin sensor of misfolded glycoproteins in the ER lumen

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

A genome-wide screen identifies Yos9p as essential for ER-associated degradation of glycoproteins

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

A luminal surveillance complex that selects misfolded glycoproteins for ER-associated degradation

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Endoplasmic reticulum degradation requires lumen to cytosol signaling. Transmembrane control of Hrd1p by Hrd3p.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

ERAD substrates: which way out?

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Hrd1p/Der3p is a membrane-anchored ubiquitin ligase required for ER-associated degradation.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Der3p/Hrd1p is required for endoplasmic reticulum-associated degradation of misfolded lumenal and integral membrane proteins

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Membrane topology and function of Der3/Hrd1p as a ubiquitin-protein ligase (E3) involved in endoplasmic reticulum degradation

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

A regulatory link between ER-associated protein degradation and the unfolded-protein response

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

The ubiquitylation machinery of the endoplasmic reticulum

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Ubiquitin ligases, critical mediators of endoplasmic reticulum-associated degradation

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Ubiquitination is required for the retro-translocation of a short-lived luminal endoplasmic reticulum glycoprotein to the cytosol for degradation by the proteasome

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Polyubiquitination is required for US11-dependent movement of MHC class I heavy chain from endoplasmic reticulum into cytosol

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Cdc48-Ufd1-Npl4: stuck in the middle with Ub.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Protein dislocation from the ER requires polyubiquitination and the AAA-ATPase Cdc48.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Function of the p97-Ufd1-Npl4 complex in retrotranslocation from the ER to the cytosol: dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Structure of the AAA ATPase p97

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

AAA+ ATPases: achieving diversity of function with conserved machinery

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

A complex of mammalian ufd1 and npl4 links the AAA-ATPase, p97, to ubiquitin and nuclear transport pathways

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Ubx2 links the Cdc48 complex to ER-associated protein degradation

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Membrane-bound Ubx2 recruits Cdc48 to ubiquitin ligases and their substrates to ensure efficient ER-associated protein degradation

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Pex8p: an intraperoxisomal organizer of the peroxisomal import machinery

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Import of stably folded proteins into peroxisomes

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Saccharomyces cerevisiae peroxisomal thiolase is imported as a dimer.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

An oligomeric protein is imported into peroxisomes in vivo

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Analysis of the carboxyl-terminal peroxisomal targeting signal 1 in a homologous context in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Peroxisomal targeting signal-1 recognition by the TPR domains of human PEX5

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

A conserved tripeptide sorts proteins to peroxisomes

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

The difference in recognition of terminal tripeptides as peroxisomal targeting signal 1 between yeast and human is due to different affinities of their receptor Pex5p to the cognate signal and to residues adjacent to it.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Characterization of the peroxisomal cycling receptor, Pex5p, using a cell-free in vitro import system

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Characterization of peroxisomal Pex5p from rat liver. Pex5p in the Pex5p-Pex14p membrane complex is a transmembrane protein

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Physical interactions of the peroxisomal targeting signal 1 receptor pex5p, studied by fluorescence correlation spectroscopy

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Ubiquitination of mammalian Pex5p, the peroxisomal import receptor.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

A conserved cysteine is essential for Pex4p-dependent ubiquitination of the peroxisomal import receptor Pex5p

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

A novel ubiquitination factor, E4, is involved in multiubiquitin chain assembly.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Ubiquitination of the peroxisomal import receptor Pex5p is required for its recycling

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Ubiquitination of the peroxisomal targeting signal type 1 receptor, Pex5p, suggests the presence of a quality control mechanism during peroxisomal matrix protein import

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Pex2 and pex12 function as protein-ubiquitin ligases in peroxisomal protein import

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Pex10p functions as an E3 ligase for the Ubc4p-dependent ubiquitination of Pex5p.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Mechanisms underlying ubiquitination

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Shuttling mechanism of peroxisome targeting signal type 1 receptor Pex5: ATP-independent import and ATP-dependent export

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Functional role of the AAA peroxins in dislocation of the cycling PTS1 receptor back to the cytosol

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Overexpression of Pex15p, a phosphorylated peroxisomal integral membrane protein required for peroxisome assembly in S.cerevisiae, causes proliferation of the endoplasmic reticulum membrane

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

The pathogenic peroxin Pex26p recruits the Pex1p-Pex6p AAA ATPase complexes to peroxisomes

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Protein targeting into secondary plastids

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

More membranes, more proteins: complex protein import mechanisms into secondary plastids

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Principles of protein and lipid targeting in secondary symbiogenesis: euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Filling the gap, evolutionarily conserved Omp85 in plastids of chromalveolates

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Toxoplasma gondii Tic20 is essential for apicoplast protein import

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Transport of nuclear-encoded proteins into secondarily evolved plastids

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

New mechanistic insights into pre-protein transport across the second outermost plastid membrane of diatoms

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Sec61p is part of the endoplasmic reticulum-associated degradation machinery

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Sec61-mediated transfer of a membrane protein from the endoplasmic reticulum to the proteasome for destruction

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Sec61p is required for ERAD-L: genetic dissection of the translocation and ERAD-L functions of Sec61P using novel derivatives of CPY.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Lack of phylogenetic support for a supposed actinobacterial origin of peroxisomes.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Contribution of the endoplasmic reticulum to peroxisome formation.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Protein homology detection by HMM-HMM comparison

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201100007

21 January 2018

Identifiers

10.1002/BIES.201100007

1 reference

Europe PubMed Central

PubMed publication ID

24 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

24 August 2017

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