(Q37894570)

24 August 2017

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title

Deeply dissecting stemness: making sense to non-coding RNAs in stem cells (English)

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24 August 2017

2

Pascal Gellert

1 reference

24 August 2017

Shizuka Uchida

1

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24 August 2017

Thomas Braun

series ordinal

3

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24 August 2017

publication date

1 March 2012

1 reference

Stem Cell Reviews and Reports

24 August 2017

published in

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24 August 2017

volume

8

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24 August 2017

issue

1

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24 August 2017

page(s)

78-86

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Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

24 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Serial analysis of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

The impact of next-generation sequencing technology on genetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Microarray data normalization and transformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Detection and normalization of biases present in spotted cDNA microarray data: a composite method addressing dye, intensity-dependent, spatially-dependent, and print-order biases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

'The 39 steps' in gene expression profiling: critical issues and proposed best practices for microarray experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Pathways to the analysis of microarray data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Pre-processing of microarray data and analysis of differential expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Bioinformatics analysis of microarray data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Making informed choices about microarray data analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

An anatomy of normal and malignant gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

21 January 2018

Understanding SAGE data

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Robust-LongSAGE (RL-SAGE): a substantially improved LongSAGE method for gene discovery and transcriptome analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Current-generation high-throughput sequencing: deepening insights into mammalian transcriptomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

RNA-Seq: a revolutionary tool for transcriptomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Sequencing technologies - the next generation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Alternative isoform regulation in human tissue transcriptomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Construction of small RNA cDNA libraries for deep sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Discovering microRNAs from deep sequencing data using miRDeep

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Tiny RNAs associated with transcription start sites in animals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Post-transcriptional processing generates a diversity of 5'-modified long and short RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Genome-wide mapping of in vivo protein-DNA interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

GATA-1 binding sites mapped in the beta-globin locus by using mammalian chIp-chip analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Instruments and methods in proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Two-dimensional gel electrophoresis in proteomics: Past, present and future

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Back to the basics: Maximizing the information obtained by quantitative two dimensional gel electrophoresis analyses by an appropriate experimental design and statistical analyses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

The potential for proteomic definition of stem cell populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

A proteomic approach to studying the differentiation of neural stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Secretome of primary cultures of human adipose-derived stem cells: modulation of serpins by adipogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Coupled global and targeted proteomics of human embryonic stem cells during induced differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Plasma membrane proteomics of human embryonic stem cells and human embryonal carcinoma cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

PEDF from mouse mesenchymal stem cell secretome attracts fibroblasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Elucidating the secretion proteome of human embryonic stem cell-derived mesenchymal stem cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Approaches and Applications of Quantitative LC-MS for Proteomics and Activitomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Overview of Quantitative LC-MS Techniques for Proteomics and Activitomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Glycoproteomic analysis of glioblastoma stem cell differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Metabolic oxidation regulates embryonic stem cell differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Large scale phosphoproteome profiles comprehensive features of mouse embryonic stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

RNA dust: where are the genes?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Evolution and functions of long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Antisense transcription in the mammalian transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

The transcriptional landscape of the mammalian genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Long noncoding RNAs: functional surprises from the RNA world

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

MicroRNAs as regulators of differentiation and cell fate decisions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

MicroRNA gene regulatory pathways in the establishment and maintenance of ESC identity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

A brief introduction to RNAi and microRNAs in stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Highly ordered spatial organization of the structural long noncoding NEAT1 RNAs within paraspeckle nuclear bodies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Direct visualization of the co-transcriptional assembly of a nuclear body by noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Long noncoding RNA as modular scaffold of histone modification complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

GENCODE: producing a reference annotation for ENCODE

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Structured RNAs in the ENCODE selected regions of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Mapping of small RNAs in the human ENCODE regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Long noncoding RNAs with enhancer-like function in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Functional genomics: new insights into the 'function' of low levels of gene expression in stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Locked nucleic acids (LNAs) reveal sequence requirements and kinetics of Xist RNA localization to the X chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

The development of high-throughput screening approaches for stem cell engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Forward RNAi screens in primary human hematopoietic stem/progenitor cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

A high-throughput siRNA library screen identifies osteogenic suppressors in human mesenchymal stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

An integrated approach for the systematic identification and characterization of heart-enriched genes with unknown functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Database resources of the National Center for Biotechnology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Exon Array Analyzer: a web interface for Affymetrix exon array analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Identification of novel stem cell markers using gap analysis of gene expression data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

mRNA-Seq whole-transcriptome analysis of a single cell

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

An improved single-cell cDNA amplification method for efficient high-density oligonucleotide microarray analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Stem cell markers: insights from membrane proteomics?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Comparative proteome and transcriptome analyses of embryonic stem cells during embryoid body-based differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Multipotent adult germline stem cells and embryonic stem cells: comparative proteomic approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Comparative proteomic analysis of human mesenchymal and embryonic stem cells: towards the definition of a mesenchymal stem cell proteomic signature.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Proteome profiling of mouse embryonic stem cells to define markers for cell differentiation and embryotoxicity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Screening the mammalian extracellular proteome for regulators of embryonic human stem cell pluripotency

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Expanding the mouse embryonic stem cell proteome: combining three proteomic approaches

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Quantitative top-down proteomics of SILAC labeled human embryonic stem cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

A human protein atlas for normal and cancer tissues based on antibody proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Towards a knowledge-based Human Protein Atlas

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Epigenetic signatures associated with different levels of differentiation potential in human stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

A multi-instrumental approach to identify and purify very small embryonic like stem cells (VSELs) from adult tissues

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Novel epigenetic mechanisms that control pluripotency and quiescence of adult bone marrow-derived Oct4(+) very small embryonic-like stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Molecular characterization of isolated from murine adult tissues very small embryonic/epiblast like stem cells (VSELs).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Chromatin structure and gene expression programs of human embryonic and induced pluripotent stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Epigenetic memory in induced pluripotent stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Cell type of origin influences the molecular and functional properties of mouse induced pluripotent stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Lab-specific gene expression signatures in pluripotent stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

A glossary for stem-cell biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

Quantitative proteomics reveals posttranslational control as a regulatory factor in primary hematopoietic stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12015-011-9294-Y

C-It: a knowledge database for tissue-enriched genes

21 January 2018

1 reference

12 December 2020

Unique glycerophospholipid signature in retinal stem cells correlates with enzymatic functions of diverse long-chain acyl-CoA synthetases

1 reference

12 December 2020

Single-cell laser-capture microdissection and RNA amplification

1 reference

12 December 2020

Identification of mouse embryonic stem cell-associated proteins

1 reference

12 December 2020

Paraspeckles: a novel nuclear domain

1 reference

12 December 2020

10.1007/S12015-011-9294-Y

Identifiers

DOI

1 reference

24 August 2017

1 reference