(Q37970441)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

title

A systems-level approach for metabolic engineering of yeast cell factories (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

4

1 reference

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19 January 2020

António Roldão

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Verena Siewers

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

author name string

Il-Kwon Kim

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

publication date

10 January 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

volume

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

page(s)

228-248

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22188344%20AND%20SRC:MED&resulttype=core&format=json

Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.

19 January 2020

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Engineering yeast transcription machinery for improved ethanol tolerance and production.

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Synthetic RNA modules for fine-tuning gene expression levels in yeast by modulating RNase III activity

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Engineering ligand-responsive RNA controllers in yeast through the assembly of RNase III tuning modules

21 January 2018

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21 January 2018

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Metabolic engineering of Saccharomyces cerevisiae for the synthesis of the wine-related antioxidant resveratrol

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Isotope dilution mass spectrometry and the National Reference System

21 January 2018

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Lactate production yield from engineered yeasts is dependent from the host background, the lactate dehydrogenase source and the lactate export.

21 January 2018

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Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays

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In silico aided metabolic engineering of Saccharomyces cerevisiae for improved bioethanol production

21 January 2018

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Improved vanillin production in baker's yeast through in silico design

21 January 2018

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Optknock: a bilevel programming framework for identifying gene knockout strategies for microbial strain optimization

21 January 2018

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Evolutionary engineering of multiple-stress resistant Saccharomyces cerevisiae.

21 January 2018

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Determination of the cytosolic free NAD/NADH ratio in Saccharomyces cerevisiae under steady-state and highly dynamic conditions

21 January 2018

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Integrated multilaboratory systems biology reveals differences in protein metabolism between two reference yeast strains

21 January 2018

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An in vivo data-driven framework for classification and quantification of enzyme kinetics and determination of apparent thermodynamic data

21 January 2018

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Metabolic pathway analysis of a recombinant yeast for rational strain development

21 January 2018

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Engineering of a mammalian O-glycosylation pathway in the yeast Saccharomyces cerevisiae: production of O-fucosylated epidermal growth factor domains.

21 January 2018

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A comprehensive method for the quantification of the non-oxidative pentose phosphate pathway intermediates in Saccharomyces cerevisiae by GC-IDMS.

21 January 2018

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BioMet Toolbox: genome-wide analysis of metabolism

21 January 2018

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Synthetic protein scaffolds provide modular control over metabolic flux.

21 January 2018

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Production of tranilast [N-(3',4'-dimethoxycinnamoyl)-anthranilic acid] and its analogs in yeast Saccharomyces cerevisiae

21 January 2018

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Bridging the gap between fluxomics and industrial biotechnology

21 January 2018

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Genetic variation shapes protein networks mainly through non-transcriptional mechanisms

21 January 2018

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The genome-wide screening of yeast deletion mutants to identify the genes required for tolerance to ethanol and other alcohols

21 January 2018

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Creation of a bacterial cell controlled by a chemically synthesized genome

21 January 2018

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Isotope dilution quantification of ultratrace gamma-glutamyl-Se-methylselenocysteine species using HPLC with enhanced ICP-MS detection by ultrasonic nebulisation or carbon-loaded plasma

21 January 2018

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Elimination of glycerol production in anaerobic cultures of a Saccharomyces cerevisiae strain engineered to use acetic acid as an electron acceptor.

21 January 2018

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The stress response factors Yap6, Cin5, Phd1, and Skn7 direct targeting of the conserved co-repressor Tup1-Ssn6 in S. cerevisiae.

21 January 2018

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Promoter library designed for fine-tuned gene expression in Pichia pastoris

21 January 2018

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Metabolic pathway engineering based on metabolomics confers acetic and formic acid tolerance to a recombinant xylose-fermenting strain of Saccharomyces cerevisiae

21 January 2018

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Exploring the diversity of complex metabolic networks.

21 January 2018

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A Linear Steady-State Treatment of Enzymatic Chains. General Properties, Control and Effector Strength

21 January 2018

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Metabolic profiling as a tool for revealing Saccharomyces interactions during wine fermentation.

21 January 2018

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Codon replacement in the PGK1 gene of Saccharomyces cerevisiae: experimental approach to study the role of biased codon usage in gene expression

21 January 2018

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Unravelling evolutionary strategies of yeast for improving galactose utilization through integrated systems level analysis

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21 January 2018

RNA synthetic biology

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Metabolic engineering of Saccharomyces cerevisiae for efficient production of pure L-(+)-lactic acid

21 January 2018

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The mechanism of eukaryotic translation initiation and principles of its regulation

21 January 2018

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The level of glucose‐6‐phosphate dehydrogenase activity strongly influences xylose fermentation and inhibitor sensitivity in recombinant Saccharomyces cerevisiae strains

21 January 2018

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Manufacturing molecules through metabolic engineering

21 January 2018

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Systems-level engineering of nonfermentative metabolism in yeast

21 January 2018

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Expression of hepatitis B surface antigen S domain in recombinant Saccharomyces cerevisiae using GAL1 promoter

21 January 2018

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Optimizing the secondary structure of human papillomavirus type 16 L1 mRNA enhances L1 protein expression in Saccharomyces cerevisiae

21 January 2018

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Cloning of casbene and neocembrene synthases from Euphorbiaceae plants and expression in Saccharomyces cerevisiae.

21 January 2018

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Yeast secretory expression of insulin precursors

21 January 2018

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A fast and efficient translational control system for conditional expression of yeast genes

21 January 2018

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Differential glucose repression in common yeast strains in response to HXK2 deletion

21 January 2018

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Reciprocal sign epistasis between frequently experimentally evolved adaptive mutations causes a rugged fitness landscape

21 January 2018

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Random mutagenesis methods for in vitro directed enzyme evolution

21 January 2018

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Rapid sampling, cell inactivation and evaluation of low extracellular glucose concentrations during fed-batch cultivation.

21 January 2018

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Application of sequential integration for metabolic engineering of 1,2-propanediol production in yeast

21 January 2018

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Improved galactose fermentation of Saccharomyces cerevisiae through inverse metabolic engineering

21 January 2018

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Exploiting natural variation in Saccharomyces cerevisiae to identify genes for increased ethanol resistance

21 January 2018

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Use of genome-scale metabolic models for understanding microbial physiology

21 January 2018

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Shuffling of promoters for multiple genes to optimize xylose fermentation in an engineered Saccharomyces cerevisiae strain

21 January 2018

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Engineered enzymes for chemical production

21 January 2018

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Linking genotype and phenotype of Saccharomyces cerevisiae strains reveals metabolic engineering targets and leads to triterpene hyper-producers.

21 January 2018

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Metabolic and bioprocess engineering for production of selenized yeast with increased content of seleno-methylselenocysteine

21 January 2018

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Oral treatment with Saccharomyces cerevisiae strain UFMG 905 modulates immune responses and interferes with signal pathways involved in the activation of inflammation in a murine model of typhoid fever

21 January 2018

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Critical evaluation of sampling techniques for residual glucose determination in carbon-limited chemostat culture of Saccharomyces cerevisiae

21 January 2018

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In vivo kinetics with rapid perturbation experiments in Saccharomyces cerevisiae using a second-generation BioScope.

21 January 2018

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Metabolic pathway engineering for complex polyketide biosynthesis in Saccharomyces cerevisiae.

21 January 2018

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Statistical inference methods for sparse biological time series data

21 January 2018

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Progress in metabolic engineering of Saccharomyces cerevisiae

21 January 2018

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Engineering of promoter replacement cassettes for fine-tuning of gene expression in Saccharomyces cerevisiae

21 January 2018

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Impact of systems biology on metabolic engineering of Saccharomyces cerevisiae

21 January 2018

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Codon usage variability determines the correlation between proteome and transcriptome fold changes

21 January 2018

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Integrative analysis using proteome and transcriptome data from yeast to unravel regulatory patterns at post-transcriptional level

21 January 2018

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Whole genome sequencing of Saccharomyces cerevisiae: from genotype to phenotype for improved metabolic engineering applications

21 January 2018

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Metabolic engineering of glycerol production in Saccharomyces cerevisiae

21 January 2018

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Designer zinc-finger proteins and their applications

21 January 2018

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Application of systems biology for bioprocess development

21 January 2018

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Constraints-based genome-scale metabolic simulation for systems metabolic engineering

21 January 2018

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Characterization of different promoters for designing a new expression vector in Saccharomyces cerevisiae

21 January 2018

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Evolutionary programming as a platform for in silico metabolic engineering

21 January 2018

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De novo biosynthetic pathways: rational design of microbial chemical factories

21 January 2018

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OpenFLUX: efficient modelling software for 13C-based metabolic flux analysis

21 January 2018

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Metabolic engineering of Saccharomyces cerevisiae for the biotechnological production of succinic acid

21 January 2018

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Directed evolution of a secretory leader for the improved expression of heterologous proteins and full-length antibodies in Saccharomyces cerevisiae

21 January 2018

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CE-MS for metabolomics: Developments and applications in the period 2008-2010.

21 January 2018

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OptForce: an optimization procedure for identifying all genetic manipulations leading to targeted overproductions

21 January 2018

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Metabolomics in systems microbiology

21 January 2018

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Targeted proteomics for metabolic pathway optimization: application to terpene production.

21 January 2018

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Enhanced production of a plant monoterpene by overexpression of the 3-hydroxy-3-methylglutaryl coenzyme A reductase catalytic domain in Saccharomyces cerevisiae

21 January 2018

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Production of the antimalarial drug precursor artemisinic acid in engineered yeast

21 January 2018

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Synthetic biology moving into the clinic

21 January 2018

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The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes

21 January 2018

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Synthetic biology with RNA motifs

21 January 2018

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Use of chemometrics in the selection of a Saccharomyces cerevisiae expression system for recombinant cyprosin B production.

21 January 2018

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DNA sequencing with chain-terminating inhibitors

21 January 2018

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Production of L-ascorbic acid by metabolically engineered Saccharomyces cerevisiae and Zygosaccharomyces bailii.

21 January 2018

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Computational protein design: engineering molecular diversity, nonnatural enzymes, nonbiological cofactor complexes, and membrane proteins

21 January 2018

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RAPYD--rapid annotation platform for yeast data.

21 January 2018

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DNA assembler, an in vivo genetic method for rapid construction of biochemical pathways

21 January 2018

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Metabolomics: a second-generation platform for crop and food analysis

21 January 2018

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Heterologous production of non-ribosomal peptide LLD-ACV in Saccharomyces cerevisiae

21 January 2018

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Pronounced and extensive microtubule defects in a Saccharomyces cerevisiae DIS3 mutant.

21 January 2018

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Metabolic engineering of Saccharomyces cerevisiae for the production of n-butanol

21 January 2018

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Beyond the transcripts: what controls protein variation?

21 January 2018

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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Engineered riboswitches: overview, problems and trends.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Total biosynthesis of hydrocortisone from a simple carbon source in yeast

21 January 2018

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https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Industrial biotechnology: tools and applications

21 January 2018

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https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Metabolic engineering of Saccharomyces cerevisiae for production of Eicosapentaenoic Acid, using a novel {Delta}5-Desaturase from Paramecium tetraurelia

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

System of centromeric, episomal, and integrative vectors based on drug resistance markers for Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Genome-wide identification of Saccharomyces cerevisiae genes required for maximal tolerance to ethanol

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Internal initiation in Saccharomyces cerevisiae mediated by an initiator tRNA/eIF2-independent internal ribosome entry site element

21 January 2018

1 reference

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Sensitive and convenient yeast reporter assay for high-throughput analysis by using a secretory luciferase from Cypridina noctiluca

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Enhancing the flux of D-glucose to the pentose phosphate pathway in Saccharomyces cerevisiae for the production of D-ribose and ribitol

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Directed evolution of promoters and tandem gene arrays for customizing RNA synthesis rates and regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Characterization of global yeast quantitative proteome data generated from the wild-type and glucose repression saccharomyces cerevisiae strains: the comparison of two quantitative methods

21 January 2018

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Reconstruction of the yeast Snf1 kinase regulatory network reveals its role as a global energy regulator

21 January 2018

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XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast.

21 January 2018

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Fast sampling for quantitative microbial metabolomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Directed evolution of pyruvate decarboxylase-negative Saccharomyces cerevisiae, yielding a C2-independent, glucose-tolerant, and pyruvate-hyperproducing yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Expanding a dynamic flux balance model of yeast fermentation to genome-scale

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Serial analysis of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

High-level production of beta-carotene in Saccharomyces cerevisiae by successive transformation with carotenogenic genes from Xanthophyllomyces dendrorhous

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

High-throughput metabolic state analysis: the missing link in integrated functional genomics of yeasts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

RNA-Seq: a revolutionary tool for transcriptomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Ethanol production from xylose by recombinant Saccharomyces cerevisiae expressing protein-engineered NADH-preferring xylose reductase from Pichia stipitis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Rapid sampling of yeast cells and automated assays of adenylate, citrate, pyruvate and glucose-6-phosphate pools.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Feed-forward regulation of a cell fate determinant by an RNA-binding protein generates asymmetry in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Strong eukaryotic IRESs have weak secondary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Determination of methionine and selenomethionine in yeast by species-specific isotope dilution GC/MS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Optimizing pentose utilization in yeast: the need for novel tools and approaches.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Using unnatural protein fusions to engineer resveratrol biosynthesis in yeast and Mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Engineering of glycerol utilization pathway for ethanol production by Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Engineering the monomer composition of polyhydroxyalkanoates synthesized in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

How to make a minimal genome for synthetic minimal cell

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Metabolomics, pathway regulation, and pathway discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Mapping the interaction of Snf1 with TORC1 in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X

Appropriate sampling for intracellular amino acid analysis in five phylogenetically different yeasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1567-1364.2011.00779.X