(Q38058756)

English

Whence genes in pieces: reconstruction of the exon-intron gene structures of the last eukaryotic common ancestor and other ancestral eukaryotes

scientific article

In more languages

default for all languages

No label defined

No description defined

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

0 references

Whence genes in pieces: reconstruction of the exon-intron gene structures of the last eukaryotic common ancestor and other ancestral eukaryotes (English)

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

Igor B. Rogozin

object named as

Igor B Rogozin

3

0 references

1

object named as

Eugene V Koonin

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

author name string

Miklos Csuros

2

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

publication date

8 November 2012

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

Wiley interdisciplinary reviews. RNA

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

4

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

93-105

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

Why genes in pieces?

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Pre-mRNA splicing: awash in a sea of proteins

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The spliceosome: the most complex macromolecular machine in the cell?

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

On the ancient nature of introns

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The recent origins of spliceosomal introns revisited

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The evolution of spliceosomal introns

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Testing the exon theory of genes: the evidence from protein structure

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Intron “sliding” and the diversity of intron positions

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Remarkable interkingdom conservation of intron positions and massive, lineage-specific intron loss and gain in eukaryotic evolution

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The origin of introns and their role in eukaryogenesis: a compromise solution to the introns-early versus introns-late debate?

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The path from the RNA world.

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

An overview of the introns-first theory

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

A spliceosomal intron in Giardia lamblia

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Eukaryotic evolution: early origin of canonical introns.

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The Genome of Naegleria gruberi Illuminates Early Eukaryotic Versatility

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Nucleomorph genome of Hemiselmis andersenii reveals complete intron loss and compaction as a driver of protein structure and function

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Complex spliceosomal organization ancestral to extant eukaryotes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Who's on first? The U1 snRNP-5' splice site interaction and splicing

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The U1 snRNP protein U1C recognizes the 5' splice site in the absence of base pairing

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Comparative analysis detects dependencies among the 5' splice-site positions

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

A novel role for a U5 snRNP protein in 3' splice site selection.

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Evidence that U5 snRNP recognizes the 3' splice site for catalytic step II in mammals

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Proto-splice site model of intron origin.

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Evolutionary convergence on highly-conserved 3' intron structures in intron-poor eukaryotes and insights into the ancestral eukaryotic genome

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Molecular evolution of eukaryotic genomes: hemiascomycetous yeast spliceosomal introns

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Analysis of donor splice sites in different eukaryotic organisms

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Intron evolution as a population-genetic process

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The origins of genome complexity

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Coevolution of genomic intron number and splice sites

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Complex selection on 5' splice sites in intron-rich organisms

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Origin and evolution of spliceosomal introns

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

A detailed history of intron-rich eukaryotic ancestors inferred from a global survey of 100 complete genomes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Lineage-specific loss and divergence of functionally linked genes in eukaryotes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Constrained intron structures in a microsporidian

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

An ancient spliceosomal intron in the ribosomal protein L7a gene (Rpl7a) of Giardia lamblia

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Seven newly discovered intron positions in the triose-phosphate isomerase gene: evidence for the introns-late theory

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Exon/intron structure of aldehyde dehydrogenase genes supports the "introns-late" theory.

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Toward a resolution of the introns early/late debate: only phase zero introns are correlated with the structure of ancient proteins

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Where do introns come from?

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Large-scale comparison of intron positions among animal, plant, and fungal genes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Molecular evolution: recent cases of spliceosomal intron gain?

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The evolutionary gain of spliceosomal introns: sequence and phase preferences

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Conservation versus parallel gains in intron evolution

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Complex early genes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Analysis of evolution of exon-intron structure of eukaryotic genes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

New maximum likelihood estimators for eukaryotic intron evolution

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Three distinct modes of intron dynamics in the evolution of eukaryotes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

In search of lost introns

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Malin: maximum likelihood analysis of intron evolution in eukaryotes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Vertebrate-type intron-rich genes in the marine annelid Platynereis dumerilii

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Extremely intron-rich genes in the alveolate ancestors inferred with a flexible maximum-likelihood approach

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Evolutionary dynamics of introns in plastid-derived genes in plants: saturation nearly reached but slow intron gain continues

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Evolution of spliceosomal introns following endosymbiotic gene transfer

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

What Nematode genomes tell us about the importance of horizontal gene transfers in the evolutionary history of animals

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Horizontal gene transfer in nematodes: a catalyst for plant parasitism?

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Horizontal gene transfer of microbial cellulases into nematode genomes is associated with functional assimilation and gene turnover

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Increase of functional diversity by alternative splicing

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Assessing the impact of alternative splicing on domain interactions in the human proteome

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Alternative splicing and evolution: diversification, exon definition and function

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

EST comparison indicates 38% of human mRNAs contain possible alternative splice forms.

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

ISIS, the intron information system, reveals the high frequency of alternative splicing in the human genome

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Genome-wide mapping of alternative splicing in Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Function annotation of the rice transcriptome at single-nucleotide resolution by RNA-seq

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Assessing the contribution of alternative splicing to proteome diversity in Arabidopsis thalianausing proteomics data

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Comparative genomics and evolution of alternative splicing: the pessimists' science.

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Alternative splicing: current perspectives

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Functional and evolutionary analysis of alternatively spliced genes is consistent with an early eukaryotic origin of alternative splicing

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

How did alternative splicing evolve?

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

A reappraisal of non-consensus mRNA splice sites

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Conserved sequences in a class of rare eukaryotic nuclear introns with non-consensus splice sites

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Terminal intron dinucleotide sequences do not distinguish between U2- and U12-dependent introns

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Evolutionary fates and origins of U12-type introns.

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

An early evolutionary origin for the minor spliceosome

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Computational screen for spliceosomal RNA genes aids in defining the phylogenetic distribution of major and minor spliceosomal components

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Evolutionary dynamics of U12-type spliceosomal introns

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

The splicing of U12-type introns can be a rate-limiting step in gene expression

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Splicing double: insights from the second spliceosome

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

U12 intron positions are more strongly conserved between animals and plants than U2 intron positions

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Primordial spliceosomal introns were probably U2-type

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

A glimpse of a putative pre-intron phase of eukaryotic evolution

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Prevalence of intron gain over intron loss in the evolution of paralogous gene families

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Ancestral paralogs and pseudoparalogs and their role in the emergence of the eukaryotic cell

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Intron dynamics in ribosomal protein genes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Intron distribution in ancient paralogs supports random insertion and not random loss

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Introns and the origin of nucleus-cytosol compartmentalization

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Intron-dominated genomes of early ancestors of eukaryotes

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

A structural analysis of the group II intron active site and implications for the spliceosome

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Genes in pieces: were they ever together?

1 reference

https://api.crossref.org/works/10.1002%2FWRNA.1143

21 January 2018

Identifiers

10.1002/WRNA.1143

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

27 August 2017

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q38058756&oldid=1773189951"