(Q38294358)

English

Promoter specificity for 6S RNA regulation of transcription is determined by core promoter sequences and competition for region 4.2 of sigma70.

scientific article published on 15 January 2008

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scholarly article

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Europe PubMed Central

PubMed publication ID

1 September 2017

Promoter specificity for 6S RNA regulation of transcription is determined by core promoter sequences and competition for region 4.2 of sigma70. (English)

1 reference

Europe PubMed Central

PubMed publication ID

1 September 2017

author name string

Amy T Cavanagh

1

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Europe PubMed Central

PubMed publication ID

1 September 2017

Andrew D Klocko

2

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Europe PubMed Central

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1 September 2017

Xiaochun Liu

3

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Europe PubMed Central

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1 September 2017

Karen M Wassarman

4

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Europe PubMed Central

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1 September 2017

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publication date

15 January 2008

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Europe PubMed Central

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1 September 2017

Molecular Microbiology

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Europe PubMed Central

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1 September 2017

67

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Europe PubMed Central

PubMed publication ID

1 September 2017

6

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Europe PubMed Central

PubMed publication ID

1 September 2017

1242-1256

1 reference

Europe PubMed Central

PubMed publication ID

1 September 2017

Mutational analysis of beta '260-309, a sigma 70 binding site located on Escherichia coli core RNA polymerase.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP.

1 reference

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21 January 2018

Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Regulation of rRNA transcription correlates with nucleoside triphosphate sensing

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

The complete genome sequence of Escherichia coli K-12

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Positioning of region 4 of the Escherichia coli RNA polymerase sigma(70) subunit by a transcription activator.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

DNA sequence elements located immediately upstream of the -10 hexamer in Escherichia coli promoters: a systematic study

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Structure of the bacterial RNA polymerase promoter specificity sigma subunit

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Regulation of HU alpha and HU beta by CRP and FIS in Escherichia coli.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Polypeptides containing highly conserved regions of transcription initiation factor σ70 exhibit specificity of binding to promoter DNA

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

A hydrophobic patch on the flap-tip helix of E.coli RNA polymerase mediates sigma(70) region 4 function.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Studies on the function of the riboregulator 6S RNA from E. coli: RNA polymerase binding, inhibition of in vitro transcription and synthesis of RNA-directed de novo transcripts

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Multiple Sigma Subunits and the Partitioning of Bacterial Transcription Space

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Contributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

EcoCyc: a comprehensive database resource for Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Identification of a contact site for different transcription activators in region 4 of the Escherichia coli RNA polymerase sigma70 subunit

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

On the role of the Escherichia coli RNA polymerase sigma 70 region 4.2 and alpha-subunit C-terminal domains in promoter complex formation on the extended -10 galP1 promoter

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Identification and analysis of 'extended -10' promoters in Escherichia coli.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Control of rRNA expression by small molecules is dynamic and nonredundant

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

The role of an upstream promoter interaction in initiation of bacterial transcription

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Overproduction and purification of sigmaS, the Escherichia coli stationary phase specific sigma transcription factor.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

The interaction between sigma70 and the beta-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

RNA-mediated destabilization of the sigma(70) region 4/beta flap interaction facilitates engagement of RNA polymerase by the Q antiterminator

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Factor independent activation of rrnB P1. An "extended" promoter with an upstream element that dramatically increases promoter strength

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

An intersubunit contact stimulating transcription initiation by E coli RNA polymerase: interaction of the alpha C-terminal domain and sigma region 4.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

6S RNA function enhances long-term cell survival

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

A highly conserved 6S RNA structure is required for regulation of transcription

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

6S RNA regulation of pspF transcription leads to altered cell survival at high pH.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

The -16 region, a vital sequence for the utilization of a promoter in Bacillus subtilis and Escherichia coli.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

6S RNA: a regulator of transcription

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Synthesis-mediated release of a small RNA inhibitor of RNA polymerase.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

6S RNA regulates E. coli RNA polymerase activity

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

The Escherichia coli histone-like protein HU has a role in stationary phase adaptive mutation

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

6S RNA - an ancient regulator of bacterial RNA polymerase rediscovered

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2008.06117.X

21 January 2018

Identifiers

10.1111/J.1365-2958.2008.06117.X

1 reference

Europe PubMed Central

PubMed publication ID

1 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 September 2017

ResearchGate publication ID

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