(Q38383333)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26859844%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

title

Transcriptome-wide patterns of divergence during allopatric evolution (English)

1 reference

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7 March 2020

main subject

allopatric speciation

1 reference

4

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7 March 2020

Ricardo J Pereira

1

1 reference

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7 March 2020

author name string

Felipe S Barreto

2

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7 March 2020

N Tessa Pierce

3

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7 March 2020

Ronald S Burton

5

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7 March 2020

publication date

15 March 2016

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7 March 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26859844%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

volume

25

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7 March 2020

issue

7

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7 March 2020

page(s)

1478-1493

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Genetics of ecological divergence during speciation.

7 March 2020

cites work

1 reference

Silent nucleotide polymorphisms and a phylogeny for Mycobacterium tuberculosis

21 January 2018

1 reference

Evidence for compensatory evolution of ribosomal proteins in response to rapid divergence of mitochondrial rRNA.

21 January 2018

1 reference

Elevated oxidative damage is correlated with reduced fitness in interpopulation hybrids of a marine copepod.

21 January 2018

1 reference

Energy converting NADH:quinone oxidoreductase (complex I).

21 January 2018

1 reference

A disproportionate role for mtDNA in Dobzhansky-Muller incompatibilities?

21 January 2018

1 reference

The sorry state of F2 hybrids: consequences of rapid mitochondrial DNA evolution in allopatric populations

21 January 2018

1 reference

Three divergent mitochondrial genomes from California populations of the copepod Tigriopus californicus.

21 January 2018

1 reference

BLAST+: architecture and applications

21 January 2018

1 reference

The genomic architecture of population divergence between subspecies of the European rabbit

21 January 2018

1 reference

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

21 January 2018

1 reference

Causes and evolutionary significance of genetic convergence.

21 January 2018

1 reference

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

21 January 2018

1 reference

The probability of genetic parallelism and convergence in natural populations.

21 January 2018

1 reference

Why highly expressed proteins evolve slowly

21 January 2018

1 reference

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

1 reference

Genotype-dependent variation of mitochondrial transcriptional profiles in interpopulation hybrids

21 January 2018

1 reference

Interpopulation hybrid breakdown maps to the mitochondrial genome

21 January 2018

1 reference

Surfing during population expansions promotes genetic revolutions and structuration

21 January 2018

1 reference

Proteomic discovery of previously unannotated, rapidly evolving seminal fluid genes in Drosophila

21 January 2018

1 reference

The genetic architecture of reproductive isolation during speciation-with-gene-flow in lake whitefish species pairs assessed by RAD sequencing

21 January 2018

1 reference

Reference-free population genomics from next-generation transcriptome data and the vertebrate-invertebrate gap

21 January 2018

1 reference

Full-length transcriptome assembly from RNA-Seq data without a reference genome

21 January 2018

1 reference

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

21 January 2018

1 reference

Tracing hybrid incompatibilities to single amino acid substitutions

21 January 2018

1 reference

CAP3: A DNA sequence assembly program

21 January 2018

1 reference

The genomic basis of adaptive evolution in threespine sticklebacks

21 January 2018

1 reference

Evolutionary Rate at the Molecular Level

21 January 2018

1 reference

Fast gapped-read alignment with Bowtie 2

21 January 2018

1 reference

The Sequence Alignment/Map format and SAMtools

21 January 2018

1 reference

Higher levels of sex chromosome heteromorphism are associated with markedly stronger reproductive isolation

21 January 2018

1 reference

Adaptive evolution of M3 lysin--a candidate gamete recognition protein in the Mytilus edulis species complex.

21 January 2018

1 reference

Estimating species trees from unrooted gene trees.

21 January 2018

1 reference

Positive selection in the carbohydrate recognition domains of sea urchin sperm receptor for egg jelly (suREJ) proteins

21 January 2018

1 reference

Extraordinary intraspecific diversity in oyster sperm bindin

21 January 2018

1 reference

A prominent role of KRAB-ZNF transcription factors in mammalian speciation?

21 January 2018

1 reference

Quantifying adaptive evolution in the Drosophila immune system

21 January 2018

1 reference

The Nearly Neutral Theory of Molecular Evolution

21 January 2018

1 reference

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

21 January 2018

1 reference

Ecological novelty by hybridization: experimental evidence for increased thermal tolerance by transgressive segregation in Tigriopus californicus

21 January 2018

1 reference

Quantitative prediction of molecular clock and ka/ks at short timescales

21 January 2018

1 reference

Population size changes reshape genomic patterns of diversity

21 January 2018

1 reference

The molecular evolutionary basis of species formation

21 January 2018

1 reference

Interpopulation hybridization results in widespread viability selection across the genome in Tigriopus californicus

21 January 2018

1 reference

Excess amino acid polymorphism in mitochondrial DNA: contrasts among genes from Drosophila, mice, and humans

21 January 2018

1 reference

Cytonuclear coevolution: the genomics of cooperation

21 January 2018

1 reference

MACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codons

21 January 2018

1 reference

Functional coadaptation between cytochrome c and cytochrome c oxidase within allopatric populations of a marine copepod

21 January 2018

1 reference

Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis

21 January 2018

1 reference

Shared selective pressure and local genomic landscape lead to repeatable patterns of genomic divergence in sunflowers

21 January 2018

1 reference

Comparisons of dN/dS are time dependent for closely related bacterial genomes

21 January 2018

1 reference

Comparative population genomics in animals uncovers the determinants of genetic diversity.

21 January 2018

1 reference

Quality control and preprocessing of metagenomic datasets

21 January 2018

1 reference

STRAW: Species TRee Analysis Web server

21 January 2018

1 reference

The genetics and pathology of oxidative phosphorylation

21 January 2018

1 reference

Stick insect genomes reveal natural selection's role in parallel speciation

21 January 2018

1 reference

Is genetic evolution predictable?

21 January 2018

1 reference

Estimation of the Neutrality Index

21 January 2018

1 reference

Gene expression intensity shapes evolutionary rates of the proteins encoded by the vertebrate genome

21 January 2018

1 reference

Evolutionary EST analysis identifies rapidly evolving male reproductive proteins in Drosophila

21 January 2018

1 reference

Positive Darwinian selection drives the evolution of several female reproductive proteins in mammals

21 January 2018

1 reference

Evolutionary expressed sequence tag analysis of Drosophila female reproductive tracts identifies genes subjected to positive selection

21 January 2018

1 reference

The population genomics of a fast evolver: high levels of diversity, functional constraint, and molecular adaptation in the tunicate Ciona intestinalis

21 January 2018

1 reference

Quantifying the elevation of mitochondrial DNA evolutionary substitution rates over nuclear rates in the intertidal copepod Tigriopus californicus.

21 January 2018

1 reference

Evolution of interacting proteins in the mitochondrial electron transport system in a marine copepod

21 January 2018

1 reference

Investigations of fine-scale phylogeography in Tigriopus californicus reveal historical patterns of population divergence

21 January 2018

1 reference

Nonlinear dynamics of nonsynonymous (dN) and synonymous (dS) substitution rates affects inference of selection

21 January 2018

1 reference

PAML 4: phylogenetic analysis by maximum likelihood

21 January 2018

1 reference

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1111/MEC.13579

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26859844%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1 reference