(Q38390848)

2 September 2017

title

Using MSDchem to search the PDB ligand dictionary (English)

1 reference

2 September 2017

3

Kim Henrick

1 reference

2 September 2017

author name string

Dimitris Dimitropoulos

series ordinal

1

1 reference

2 September 2017

John Ionides

series ordinal

2

1 reference

2 September 2017

publication date

1 October 2006

1 reference

Current Protocols in Bioinformatics

2 September 2017

published in

1 reference

2 September 2017

volume

Chapter 14

1 reference

2 September 2017

page(s)

Unit14.3

1 reference

Basic local alignment search tool

2 September 2017

cites work

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

UniProt: the Universal Protein knowledgebase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Predicting functions from protein sequences--where are the bottlenecks?

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

A phylogenomic investigation of CYCLOIDEA-like TCP genes in the Leguminosae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Intrinsic errors in genome annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

The multiplicity of domains in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Phylogenetic analysis and gene functional predictions: phylogenomics in action

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Phylogenies from molecular sequences: inference and reliability

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Distinguishing Homologous from Analogous Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Divergent evolution of enzymatic function: mechanistically diverse superfamilies and functionally distinct suprafamilies

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Relative efficiencies of the maximum likelihood, maximum parsimony, and neighbor-joining methods for estimating protein phylogeny.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

OrthoGUI: graphical presentation of Orthostrapper results

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

MRBAYES: Bayesian inference of phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

An apology for orthologs - or brave new memes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Database of homology-derived protein structures and the structural meaning of sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Phylogenomic inference of protein molecular function: advances and challenges

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Automated ortholog inference from phylogenetic trees and calculation of orthology reliability

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

A comprehensive comparison of multiple sequence alignment programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

Elision: a method for accommodating multiple molecular sequence alignments with alignment-ambiguous sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

ATV: display and manipulation of annotated phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

RIO: analyzing proteomes by automated phylogenomics using resampled inference of orthologs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0609S11

10.1002/0471250953.BI0609S11

21 January 2018

Identifiers

DOI

1 reference

2 September 2017

1 reference