(Q38406694)

2 September 2017

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title

The pig gut microbial diversity: Understanding the pig gut microbial ecology through the next generation high throughput sequencing (English)

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high-throughput sequencing

2 September 2017

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Hyeun Bum Kim

1

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2 September 2017

Richard E Isaacson

series ordinal

2

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2 September 2017

publication date

23 March 2015

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2 September 2017

published in

Veterinary Microbiology

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2 September 2017

volume

177

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2 September 2017

issue

3-4

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2 September 2017

page(s)

242-251

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maintained by WikiProject

2 September 2017

1 reference

Antibiotics in feed induce prophages in swine fecal microbiomes

1 reference

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Host-bacterial mutualism in the human intestine

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Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions

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Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases

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INDIGENOUS, NORMAL, AND AUTOCHTHONOUS FLORA OF THE GASTROINTESTINAL TRACT

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UCHIME improves sensitivity and speed of chimera detection

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The phylogeny of prokaryotes

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Biases during DNA extraction of activated sludge samples revealed by high throughput sequencing

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Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

7 January 2021

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Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

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Prevotella copri sp. nov. and Prevotella stercorea sp. nov., isolated from human faeces.

7 January 2021

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A framework for human microbiome research

7 January 2021

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The intestinal microbiome of the pig.

7 January 2021

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Microbial shifts in the swine distal gut in response to the treatment with antimicrobial growth promoter, tylosin

7 January 2021

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Longitudinal investigation of the age-related bacterial diversity in the feces of commercial pigs

7 January 2021

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Comparative fecal metagenomics unveils unique functional capacity of the swine gut

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Evolution of mammals and their gut microbes

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Ecological and evolutionary forces shaping microbial diversity in the human intestine

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Effects of live yeast on the performance, nutrient digestibility, gastrointestinal microbiota and concentration of volatile fatty acids in weanling pigs

7 January 2021

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Comparison of next-generation sequencing systems

7 January 2021

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Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers

7 January 2021

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Short pyrosequencing reads suffice for accurate microbial community analysis

7 January 2021

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Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations.

7 January 2021

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Carbadox has both temporary and lasting effects on the swine gut microbiota.

7 January 2021

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In-feed antibiotic effects on the swine intestinal microbiome

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Bacterial species identification after DNA amplification with a universal primer pair

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Murine gut microbiota is defined by host genetics and modulates variation of metabolic traits

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7 January 2021

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Microbial ecology and evolution: a ribosomal RNA approach

7 January 2021

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Ribosomal RNA phylogeny and the primary lines of evolutionary descent

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Assessment of fecal bacterial diversity among healthy piglets during the weaning transition

7 January 2021

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Pyrosequencing-based analysis of fecal microbial communities in three purebred pig lines

7 January 2021

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7 January 2021

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Characterisation of gut microbiota in Ossabaw and Göttingen minipigs as models of obesity and metabolic syndrome

7 January 2021

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7 January 2021

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Accurate determination of microbial diversity from 454 pyrosequencing data

7 January 2021

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Production of menaquinones by intestinal anaerobes

7 January 2021

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Effect of Lactobacillus salivarius bacteriocin Abp118 on the mouse and pig intestinal microbiota

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7 January 2021

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7 January 2021

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Next-generation sequencing transforms today's biology

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Next-generation DNA sequencing

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A quantitative map of nucleotide substitution rates in bacterial rRNA.

7 January 2021

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7 January 2021

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Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

7 January 2021

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Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studies

7 January 2021

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Choice of bacterial DNA extraction method from fecal material influences community structure as evaluated by metagenomic analysis

7 January 2021

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Microbial 16S rRNA Ion Tag and community metagenome sequencing using the Ion Torrent (PGM) Platform

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7 January 2021

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7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VETMIC.2015.03.014

Deconjugation of bile acids by intestinal lactobacilli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VETMIC.2015.03.014

inferred from DOI database lookup

7 January 2021

based on heuristic

Influence of certain indigenous gastrointestinal microorganisms on duodenal alkaline phosphatase in mice

1 reference

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inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/J.VETMIC.2015.03.014

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2 September 2017

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