(Q38502495)

3 September 2017

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title

"Hit-and-run": Transcription factors get caught in the act. (English)

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3 September 2017

3

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3 September 2017

Varodom Charoensawan

1

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author name string

Claudia Martinho

series ordinal

2

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PubMed ID

26010075

3 September 2017

language of work or name

English

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publication date

21 May 2015

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3 September 2017

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3 September 2017

37

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3 September 2017

7

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3 September 2017

748-754

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Transcriptional regulation and its misregulation in disease.

3 September 2017

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Orchestration of floral initiation by APETALA1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

LEAFY target genes reveal floral regulatory logic, cis motifs, and a link to biotic stimulus response

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

The glucocorticoid receptor: rapid exchange with regulatory sites in living cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

TARGET: a transient transformation system for genome-wide transcription factor target discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

A gel electrophoresis method for quantifying the binding of proteins to specific DNA regions: application to components of the Escherichia coli lactose operon regulatory system

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

High-throughput assay for determining specificity and affinity of protein-DNA binding interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

DNA-binding specificities of human transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Diversity and complexity in DNA recognition by transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Prediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

An overview of the structures of protein-DNA complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Detecting regulatory sites using PhyloGibbs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Predictive modeling of genome-wide mRNA expression: from modules to molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Transcriptional regulatory networks in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Sequencing and comparison of yeast species to identify genes and regulatory elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Tissue-specific transcriptional regulation has diverged significantly between human and mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Comparative analysis of regulatory information and circuits across distant species

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

A promiscuous intermediate underlies the evolution of LEAFY DNA binding specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

What does biologically meaningful mean? A perspective on gene regulatory network validation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Animal transcription networks as highly connected, quantitative continua

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

In pursuit of design principles of regulatory sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

DNA sequence preferences of transcriptional activators correlate more strongly than repressors with nucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Extensive role of the general regulatory factors, Abf1 and Rap1, in determining genome-wide chromatin structure in budding yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Transcription factor PIF4 controls the thermosensory activation of flowering

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Uncovering the interplay between DNA sequence preferences of transcription factors and nucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

ChIP-seq: advantages and challenges of a maturing technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Probing DNA shape and methylation state on a genomic scale with DNase I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

High-resolution mapping and characterization of open chromatin across the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

DNase footprint signatures are dictated by factor dynamics and DNA sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Refined DNase-seq protocol and data analysis reveals intrinsic bias in transcription factor footprint identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

A gateway-compatible yeast one-hybrid system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

A gene-centered C. elegans protein-DNA interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

A yeast one-hybrid and microfluidics-based pipeline to map mammalian gene regulatory networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

An Arabidopsis gene regulatory network for secondary cell wall synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Comprehensive genome-wide protein-DNA interactions detected at single-nucleotide resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Dynamic regulation of transcriptional states by chromatin and transcription factors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

21 January 2018

Transcription dynamics

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

A rapid micro chromatin immunoprecipitation assay (microChIP).

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Transcription factor ATF interacts with the TATA factor to facilitate establishment of a preinitiation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Ligand-specific dynamics of the progesterone receptor in living cells and during chromatin remodeling in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Dynamic exchange at regulatory elements during chromatin remodeling underlies assisted loading mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Integrating nuclear receptor mobility in models of gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

A hyper-dynamic equilibrium between promoter-bound and nucleoplasmic dimers controls NF-kappaB-dependent gene activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

The "fourth dimension" of gene transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Single-molecule dynamics of enhanceosome assembly in embryonic stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Single-molecule analysis of transcription factor binding at transcription sites in live cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Pioneer transcription factors: establishing competence for gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Dynamic nucleosomes and gene transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Genome-wide measurement of protein-DNA binding dynamics using competition ChIP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Genome-wide protein-DNA binding dynamics suggest a molecular clutch for transcription factor function

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Comprehensive protein-based artificial microRNA screens for effective gene silencing in plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Nucleocytoplasmic shuttling revealed by FRAP and FLIP technologies

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Monitoring protein interactions in living cells with fluorescence lifetime imaging microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Single-molecule imaging of transcription factor binding to DNA in live mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

Induction of protein secretory pathway is required for systemic acquired resistance

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

A hit-and-run mechanism for transcriptional activation?

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400186

21 January 2018

Identifiers

DOI

10.1002/BIES.201400186

1 reference

3 September 2017

1 reference

PubMed ID

26010075