(Q38733840)

PubMed publication ID

27783602

5 September 2017

title

Local regulation of gene expression by lncRNA promoters, transcription and splicing (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

9

Eric S Lander

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

1

Jesse M Engreitz

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

author name string

Jenna E Haines

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

Elizabeth M Perez

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

Glen Munson

4

1 reference

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13 May 2020

Michael Kane

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

Patrick E McDonel

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

Mitchell Guttman

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

language of work or name

English

0 references

publication date

26 October 2016

1 reference

PubMed publication ID

5 September 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

volume

539

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

issue

7629

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

page(s)

452-455

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

Transcriptional interference--a crash course

13 May 2020

cites work

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12 December 2020

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The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin

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Lessons from X-chromosome inactivation: long ncRNA as guides and tethers to the epigenome

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

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Software for computing and annotating genomic ranges

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The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome

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12 December 2020

RNA-RNA interactions enable specific targeting of noncoding RNAs to nascent Pre-mRNAs and chromatin sites

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12 December 2020

Base-pair-resolution genome-wide mapping of active RNA polymerases using precision nuclear run-on (PRO-seq).

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12 December 2020

Unlinking an lncRNA from Its Associated cis Element

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12 December 2020

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

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12 December 2020

Long noncoding RNAs with enhancer-like function in human cells

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12 December 2020

RNA maps reveal new RNA classes and a possible function for pervasive transcription

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12 December 2020

Mediator and cohesin connect gene expression and chromatin architecture

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12 December 2020

The evolution of lncRNA repertoires and expression patterns in tetrapods

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12 December 2020

Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system

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12 December 2020

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12 December 2020

Modification of enhancer chromatin: what, how, and why?

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12 December 2020

DNA targeting specificity of RNA-guided Cas9 nucleases

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12 December 2020

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12 December 2020

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

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12 December 2020

A unified architecture of transcriptional regulatory elements

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12 December 2020

The transcriptional landscape of the mammalian genome

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12 December 2020

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12 December 2020

Systematic comparison of monoclonal versus polyclonal antibodies for mapping histone modifications by ChIP-seq

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12 December 2020

A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression

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12 December 2020

A novel multi-alignment pipeline for high-throughput sequencing data

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12 December 2020

Ripples from neighbouring transcription.

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12 December 2020

Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing

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12 December 2020

RNA antisense purification (RAP) for mapping RNA interactions with chromatin

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12 December 2020

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12 December 2020

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

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12 December 2020

The variant call format and VCFtools

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12 December 2020

Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans

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12 December 2020

Fast gapped-read alignment with Bowtie 2

1 reference

12 December 2020

Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

1 reference

12 December 2020

The human genome browser at UCSC

1 reference

12 December 2020

Principles of long noncoding RNA evolution derived from direct comparison of transcriptomes in 17 species.

1 reference

12 December 2020

Precise maps of RNA polymerase reveal how promoters direct initiation and pausing

1 reference

12 December 2020

Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation

1 reference

12 December 2020

Identifying novel constrained elements by exploiting biased substitution patterns

1 reference

12 December 2020

Architectural and Functional Commonalities between Enhancers and Promoters

1 reference

12 December 2020

Integrative genomics viewer

1 reference

12 December 2020

Genetic screens in human cells using the CRISPR-Cas9 system

1 reference

12 December 2020

High-throughput mapping of regulatory DNA.

1 reference

12 December 2020

Cis-acting noncoding RNAs: friends and foes

1 reference

12 December 2020

Introns increase transcriptional efficiency in transgenic mice

1 reference

12 December 2020

Evolutionary analysis across mammals reveals distinct classes of long non-coding RNAs

1 reference

12 December 2020

Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions

1 reference

12 December 2020

Topological domains in mammalian genomes identified by analysis of chromatin interactions

1 reference

12 December 2020

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

1 reference

12 December 2020

Stimulatory effect of splicing factors on transcriptional elongation

1 reference

12 December 2020

Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene

1 reference

12 December 2020

An encyclopedia of mouse DNA elements (Mouse ENCODE).

1 reference

12 December 2020

Coordinate gene regulation during hematopoiesis is related to genomic organization

1 reference

12 December 2020

Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance

1 reference

12 December 2020

Opposing Roles for the lncRNA Haunt and Its Genomic Locus in Regulating HOXA Gene Activation during Embryonic Stem Cell Differentiation

1 reference

12 December 2020

BEDTools: a flexible suite of utilities for comparing genomic features

1 reference

12 December 2020

Multiplex genome engineering using CRISPR/Cas systems

1 reference

12 December 2020

Considerations when investigating lncRNA function in vivo.

1 reference

12 December 2020

Definition of an efficient synthetic poly(A) site

1 reference

12 December 2020

Mouse genomic variation and its effect on phenotypes and gene regulation

1 reference

12 December 2020

Identifiers

DOI

10.1038/NATURE20149

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6853796&resulttype=core&format=json

13 May 2020

PubMed publication ID

27783602

1 reference