(Q38776664)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28032622%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

title

Epitranscriptome sequencing technologies: decoding RNA modifications (English)

1 reference

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4 April 2020

3

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4 April 2020

author name string

Xiaoyu Li

series ordinal

1

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4 April 2020

Xushen Xiong

series ordinal

2

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4 April 2020

publication date

1 December 2016

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4 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28032622%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

volume

14

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4 April 2020

issue

1

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4 April 2020

page(s)

23-31

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The 5′-termini of heterogeneous nuclear RNA: a comparison among molecules of different sizes and ages

4 April 2020

cites work

1 reference

12 December 2020

Novel RNA regulatory mechanisms revealed in the epitranscriptome

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12 December 2020

Pseudouridine synthases

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12 December 2020

Functions and regulation of RNA editing by ADAR deaminases

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12 December 2020

rRNA pseudouridylation defects affect ribosomal ligand binding and translational fidelity from yeast to human cells.

1 reference

12 December 2020

Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome

1 reference

12 December 2020

Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA

1 reference

12 December 2020

The pivotal regulatory landscape of RNA modifications

1 reference

12 December 2020

Antibody-nucleic acid complexes. Immunospecific recognition of 7-methylguanine- and N6-methyladenine-containing 5'-terminal oligonucleotides of mRNA

1 reference

12 December 2020

Profiling of ribose methylations in RNA by high-throughput sequencing

1 reference

12 December 2020

Crystal structure of a eukaryotic initiator tRNA

1 reference

12 December 2020

Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA.

1 reference

12 December 2020

The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

1 reference

12 December 2020

Transcriptome-wide dynamics of RNA pseudouridylation

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12 December 2020

The dynamic epitranscriptome: N6-methyladenosine and gene expression control

1 reference

12 December 2020

Characterizing 5-methylcytosine in the mammalian epitranscriptome

1 reference

12 December 2020

Identification of direct targets and modified bases of RNA cytosine methyltransferases

1 reference

12 December 2020

High-resolution mapping reveals a conserved, widespread, dynamic mRNA methylation program in yeast meiosis

1 reference

12 December 2020

Messenger RNA modifications: Form, distribution, and function

1 reference

12 December 2020

A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation

1 reference

12 December 2020

Box H/ACA small ribonucleoproteins

1 reference

12 December 2020

Sequence specificity of mRNA N6-adenosine methyltransferase

1 reference

12 December 2020

Transcriptome-wide mapping of pseudouridines: pseudouridine synthases modify specific mRNAs in S. cerevisiae

1 reference

12 December 2020

Detection of RNA modifications.

1 reference

12 December 2020

Elucidating the inosinome: global approaches to adenosine-to-inosine RNA editing

1 reference

12 December 2020

RNA editing by adenosine deaminases that act on RNA

1 reference

12 December 2020

N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection

1 reference

12 December 2020

Grand challenge commentary: RNA epigenetics?

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12 December 2020

rRNA modifications and ribosome function

1 reference

12 December 2020

N(6)-methyladenosine Modulates Messenger RNA Translation Efficiency

1 reference

12 December 2020

Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".

1 reference

12 December 2020

Illumina-based RiboMethSeq approach for mapping of 2'-O-Me residues in RNA.

1 reference

12 December 2020

NSun2-mediated cytosine-5 methylation of vault noncoding RNA determines its processing into regulatory small RNAs

1 reference

12 December 2020

High-throughput identification of C/D box snoRNA targets with CLIP and RiboMeth-seq

1 reference

12 December 2020

Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.

1 reference

12 December 2020

m(6)A-LAIC-seq reveals the census and complexity of the m(6)A epitranscriptome

1 reference

12 December 2020

Systematic identification of abundant A-to-I editing sites in the human transcriptome

1 reference

12 December 2020

Pseudouridine: the fifth RNA nucleotide with renewed interests.

1 reference

12 December 2020

Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome

1 reference

12 December 2020

N(6)-methyladenosine of HIV-1 RNA regulates viral infection and HIV-1 Gag protein expression

1 reference

12 December 2020

Identifying RNA editing sites using RNA sequencing data alone

1 reference

12 December 2020

Widespread RNA editing of embedded alu elements in the human transcriptome

1 reference

12 December 2020

A subcomplex of human mitochondrial RNase P is a bifunctional methyltransferase--extensive moonlighting in mitochondrial tRNA biogenesis

1 reference

12 December 2020

Transcriptome-wide mapping of 5-methylcytidine RNA modifications in bacteria, archaea, and yeast reveals m5C within archaeal mRNAs

1 reference

12 December 2020

Gene expression regulation mediated through reversible m⁶A RNA methylation

1 reference

12 December 2020

An in vitro system for accurate methylation of internal adenosine residues in messenger RNA

1 reference

12 December 2020

Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome

1 reference

12 December 2020

Inosine cyanoethylation identifies A-to-I RNA editing sites in the human transcriptome

1 reference

12 December 2020

Transcriptome-wide mapping reveals reversible and dynamic N(1)-methyladenosine methylome

1 reference

12 December 2020

RNA cytosine methylation analysis by bisulfite sequencing

1 reference

12 December 2020

Accurate identification of A-to-I RNA editing in human by transcriptome sequencing

1 reference

12 December 2020

Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome.

1 reference

12 December 2020

Emerging roles of RNA modification: m(6)A and U-tail

1 reference

12 December 2020

Nuclear m(6)A Reader YTHDC1 Regulates mRNA Splicing

1 reference

12 December 2020

Identification of methylated nucleosides in messenger RNA from Novikoff hepatoma cells

1 reference

12 December 2020

The emerging epitranscriptomics of long noncoding RNAs.

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12 December 2020

Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing

1 reference

12 December 2020

Use of specific chemical reagents for detection of modified nucleotides in RNA.

1 reference

12 December 2020

Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".

1 reference

12 December 2020

Widespread RNA and DNA sequence differences in the human transcriptome.

1 reference

12 December 2020

Mammalian WTAP is a regulatory subunit of the RNA N6-methyladenosine methyltransferase

1 reference

12 December 2020

RNA biochemistry. Transcriptome-wide distribution and function of RNA hydroxymethylcytosine.

1 reference

12 December 2020

Expanding the nucleotide repertoire of the ribosome with post-transcriptional modifications

1 reference

12 December 2020

5' UTR m(6)A Promotes Cap-Independent Translation

1 reference

12 December 2020

A biochemical landscape of A-to-I RNA editing in the human brain transcriptome.

1 reference

12 December 2020

Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites

1 reference

12 December 2020

The reverse transcription signature of N-1-methyladenosine in RNA-Seq is sequence dependent

1 reference

12 December 2020

Context effects on N6-adenosine methylation sites in prolactin mRNA.

1 reference

12 December 2020

HNRNPA2B1 Is a Mediator of m(6)A-Dependent Nuclear RNA Processing Events

1 reference

12 December 2020

RNA editing in regulating gene expression in the brain

1 reference

12 December 2020

Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase

1 reference

12 December 2020

Tet-mediated formation of 5-hydroxymethylcytosine in RNA.

1 reference

12 December 2020

MODOMICS: a database of RNA modification pathways--2013 update

1 reference

12 December 2020

Posttranscriptional m(6)A Editing of HIV-1 mRNAs Enhances Viral Gene Expression.

1 reference

12 December 2020

The bipartite structure of the tRNA m1A58 methyltransferase from S. cerevisiae is conserved in humans

1 reference

12 December 2020

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

1 reference

12 December 2020

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

1 reference

12 December 2020

A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation

1 reference

12 December 2020

Extensive genomic and transcriptional diversity identified through massively parallel DNA and RNA sequencing of eighteen Korean individuals.

1 reference

12 December 2020

Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: analysis by the application of a new sequencing technique.

1 reference

12 December 2020

Dynamics of Human and Viral RNA Methylation during Zika Virus Infection

1 reference

12 December 2020

Accurate identification of human Alu and non-Alu RNA editing sites

1 reference

12 December 2020

Formation and abundance of 5-hydroxymethylcytosine in RNA.

1 reference

12 December 2020

N6-methyladenosine–encoded epitranscriptomics

1 reference

12 December 2020

The birth of the Epitranscriptome: deciphering the function of RNA modifications

1 reference

12 December 2020

RTL-P: a sensitive approach for detecting sites of 2'-O-methylation in RNA molecules

1 reference

12 December 2020

N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO

1 reference

12 December 2020

Characterization and partial purification of mRNA N6-adenosine methyltransferase from HeLa cell nuclei. Internal mRNA methylation requires a multisubunit complex

1 reference

12 December 2020

Dynamics of the human and viral m(6)A RNA methylomes during HIV-1 infection of T cells.

1 reference

12 December 2020

Pseudouridylation meets next-generation sequencing

1 reference

12 December 2020

High-resolution N(6) -methyladenosine (m(6) A) map using photo-crosslinking-assisted m(6) A sequencing

1 reference

12 December 2020

Nucleotide modifications in three functionally important regions of the Saccharomyces cerevisiae ribosome affect translation accuracy

1 reference

12 December 2020

N6, O2'-dimethyladenosine a novel methylated ribonucleoside next to the 5' terminal of animal cell and virus mRNAs

1 reference

12 December 2020

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq

1 reference

12 December 2020

Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells

1 reference

12 December 2020

Identification of human tRNA:m5C methyltransferase catalysing intron-dependent m5C formation in the first position of the anticodon of the pre-tRNA Leu (CAA)

1 reference

12 December 2020

ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility

1 reference

12 December 2020

Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons

1 reference

12 December 2020

NML-mediated rRNA base methylation links ribosomal subunit formation to cell proliferation in a p53-dependent manner

1 reference

12 December 2020

Trmt61B is a methyltransferase responsible for 1-methyladenosine at position 58 of human mitochondrial tRNAs

1 reference

12 December 2020

N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells

1 reference

12 December 2020

tRNA stabilization by modified nucleotides

1 reference

12 December 2020

Function and detection of 5-methylcytosine in eukaryotic RNA.

1 reference

12 December 2020

Methylation of tRNAAsp by the DNA methyltransferase homolog Dnmt2

1 reference

12 December 2020

High-throughput single-base resolution mapping of RNA 2΄-O-methylated residues

1 reference

12 December 2020

The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNA

1 reference

12 December 2020

Comment on "Widespread RNA and DNA sequence differences in the human transcriptome"

1 reference

12 December 2020

Probing N6-methyladenosine RNA modification status at single nucleotide resolution in mRNA and long noncoding RNA

1 reference

12 December 2020

BC1-FMRP interaction is modulated by 2'-O-methylation: RNA-binding activity of the tudor domain and translational regulation at synapses

1 reference

12 December 2020

Effect of light on the nucleotide composition of rRNA of wheat seedlings

1 reference

12 December 2020

HeLa cell RNA (2'-O-methyladenosine-N6-)-methyltransferase specific for the capped 5'-end of messenger RNA

1 reference

12 December 2020

N(6)-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions

1 reference

12 December 2020

N6-methyladenosine-dependent regulation of messenger RNA stability

1 reference

12 December 2020