(Q39013218)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27863087%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

review article

1 reference

title

Posttranscriptional coordination of splicing and miRNA biogenesis in plants (English)

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27 March 2020

3

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Zofia Szweykowska-Kulinska

27 March 2020

series ordinal

9

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27 March 2020

8

Artur Jarmolowski

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27 March 2020

7

Andrzej Pacak

1 reference

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27 March 2020

Maria Barciszewska-Pacak

series ordinal

6

object named as

Maria Barciszewska-Pacak

1 reference

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27 March 2020

2

Katarzyna Knop

1 reference

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27 March 2020

4

Michal Taube

1 reference

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27 March 2020

5

Mateusz Bajczyk

1 reference

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27 March 2020

author name string

Agata Stepien

series ordinal

1

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27 March 2020

publication date

9 November 2016

1 reference

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Wiley interdisciplinary reviews. RNA

27 March 2020

published in

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27 March 2020

volume

8

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27 March 2020

issue

3

1 reference

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Expression of Arabidopsis MIRNA genes

27 March 2020

cites work

1 reference

CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana

21 January 2018

1 reference

The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation

21 January 2018

1 reference

SERRATE: a new player on the plant microRNA scene.

21 January 2018

1 reference

SERRATE is a novel nuclear regulator in primary microRNA processing in Arabidopsis

21 January 2018

1 reference

The RNA-binding proteins HYL1 and SE promote accurate in vitro processing of pri-miRNA by DCL1.

21 January 2018

1 reference

Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.

21 January 2018

1 reference

Nuclear processing and export of microRNAs in Arabidopsis.

21 January 2018

1 reference

Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs

21 January 2018

1 reference

In vitro assembly of plant RNA-induced silencing complexes facilitated by molecular chaperone HSP90.

21 January 2018

1 reference

Cyclophilin 40 facilitates HSP90-mediated RISC assembly in plants.

21 January 2018

1 reference

Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs

21 January 2018

1 reference

Human RISC couples microRNA biogenesis and posttranscriptional gene silencing

21 January 2018

1 reference

AGO1 defines a novel locus of Arabidopsis controlling leaf development.

21 January 2018

1 reference

Identification of nuclear dicing bodies containing proteins for microRNA biogenesis in living Arabidopsis plants

21 January 2018

1 reference

Widespread translational inhibition by plant miRNAs and siRNAs

21 January 2018

1 reference

Regulation of mRNA translation and stability by microRNAs

21 January 2018

1 reference

The Arabidopsis tandem zinc finger protein AtTZF1 traffics between the nucleus and cytoplasmic foci and binds both DNA and RNA.

21 January 2018

1 reference

A phosphorylated cytoplasmic autoantigen, GW182, associates with a unique population of human mRNAs within novel cytoplasmic speckles

21 January 2018

1 reference

Genome-wide computational identification of WG/GW Argonaute-binding proteins in Arabidopsis

21 January 2018

1 reference

Suppression of Arabidopsis ARGONAUTE1-mediated slicing, transgene-induced RNA silencing, and DNA methylation by distinct domains of the Cucumber mosaic virus 2b protein

21 January 2018

1 reference

MicroRNAs inhibit the translation of target mRNAs on the endoplasmic reticulum in Arabidopsis

21 January 2018

1 reference

Gene regulation by translational inhibition is determined by Dicer partnering proteins.

21 January 2018

1 reference

Biochemical evidence for translational repression by Arabidopsis microRNAs.

21 January 2018

1 reference

An mRNA m7G cap binding-like motif within human Ago2 represses translation

21 January 2018

1 reference

Nuclear localization and in vivo dynamics of a plant-specific serine/arginine-rich protein.

21 January 2018

1 reference

Structure of the Arabidopsis thaliana DCL4 DUF283 domain reveals a noncanonical double-stranded RNA-binding fold for protein-protein interaction

21 January 2018

1 reference

DICER-LIKE1: blind men and elephants in Arabidopsis development

21 January 2018

1 reference

The interaction between DCL1 and HYL1 is important for efficient and precise processing of pri-miRNA in plant microRNA biogenesis.

21 January 2018

1 reference

Location of a possible miRNA processing site in SmD3/SmB nuclear bodies in Arabidopsis.

21 January 2018

1 reference

A dominant mutation in DCL1 suppresses the hyl1 mutant phenotype by promoting the processing of miRNA

21 January 2018

1 reference

The helicase and RNaseIIIa domains of Arabidopsis Dicer-Like1 modulate catalytic parameters during microRNA biogenesis

21 January 2018

1 reference

Molecular insights into miRNA processing by Arabidopsis thaliana SERRATE

21 January 2018

1 reference

Dissecting the interactions of SERRATE with RNA and DICER-LIKE 1 in Arabidopsis microRNA precursor processing

21 January 2018

1 reference

SERRATE coordinates shoot meristem function and leaf axial patterning in Arabidopsis

21 January 2018

1 reference

mirEX 2.0 - an integrated environment for expression profiling of plant microRNAs

21 January 2018

1 reference

Specific interactions between Dicer-like proteins and HYL1/DRB-family dsRNA-binding proteins in Arabidopsis thaliana.

21 January 2018

1 reference

Structure of Arabidopsis HYPONASTIC LEAVES1 and Its Molecular Implications for miRNA Processing

21 January 2018

1 reference

The N-terminal double-stranded RNA binding domains of Arabidopsis HYPONASTIC LEAVES1 are sufficient for pre-microRNA processing.

21 January 2018

1 reference

A mutation in the Arabidopsis HYL1 gene encoding a dsRNA binding protein affects responses to abscisic acid, auxin, and cytokinin

21 January 2018

1 reference

Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs

21 January 2018

1 reference

Cloning and characterization of two subunits of Arabidopsis thaliana nuclear cap-binding complex

21 January 2018

1 reference

Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana

21 January 2018

1 reference

The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana

21 January 2018

1 reference

Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana

21 January 2018

1 reference

PRL1, an RNA-binding protein, positively regulates the accumulation of miRNAs and siRNAs in Arabidopsis

21 January 2018

1 reference

Transcription and processing of primary microRNAs are coupled by Elongator complex in Arabidopsis.

21 January 2018

1 reference

CDC5, a DNA binding protein, positively regulates posttranscriptional processing and/or transcription of primary microRNA transcripts

21 January 2018

1 reference

NOT2 proteins promote polymerase II-dependent transcription and interact with multiple MicroRNA biogenesis factors in Arabidopsis

21 January 2018

1 reference

HOS1 regulates Argonaute1 by promoting transcription of the microRNA gene MIR168b in Arabidopsis.

21 January 2018

1 reference

The Roles of Arabidopsis CDF2 in Transcriptional and Posttranscriptional Regulation of Primary MicroRNAs

21 January 2018

1 reference

Functional mapping of the plant small RNA methyltransferase: HEN1 physically interacts with HYL1 and DICER-LIKE 1 proteins.

21 January 2018

1 reference

Regulation of miRNA abundance by RNA binding protein TOUGH in Arabidopsis

21 January 2018

1 reference

The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis

21 January 2018

1 reference

The RNA-binding protein HOS5 and serine/arginine-rich proteins RS40 and RS41 participate in miRNA biogenesis in Arabidopsis

21 January 2018

1 reference

Fast-forward genetics identifies plant CPL phosphatases as regulators of miRNA processing factor HYL1.

21 January 2018

1 reference

RACK1 scaffold proteins influence miRNA abundance in Arabidopsis

21 January 2018

1 reference

Uridylation of miRNAs by hen1 suppressor1 in Arabidopsis.

21 January 2018

1 reference

A KH-domain RNA-binding protein interacts with FIERY2/CTD phosphatase-like 1 and splicing factors and is important for pre-mRNA splicing in Arabidopsis

21 January 2018

1 reference

Arabidopsis proline-rich protein important for development and abiotic stress tolerance is involved in microRNA biogenesis

21 January 2018

1 reference

A role for the RNA-binding protein MOS2 in microRNA maturation in Arabidopsis

21 January 2018

1 reference

STA1, an Arabidopsis pre-mRNA processing factor 6 homolog, is a new player involved in miRNA biogenesis

21 January 2018

1 reference

Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis.

21 January 2018

1 reference

MicroRNA regulation by RNA-binding proteins and its implications for cancer

21 January 2018

1 reference

miRBase: annotating high confidence microRNAs using deep sequencing data

21 January 2018

1 reference

Arabidopsis thaliana microRNA162 level is posttranscriptionally regulated via splicing and polyadenylation site selection

21 January 2018

1 reference

MicroRNA promoter element discovery in Arabidopsis

21 January 2018

1 reference

Comparative analysis of microRNA promoters in Arabidopsis and rice

21 January 2018

1 reference

Identification and analysis of the proximal promoters of microRNA genes in Arabidopsis

21 January 2018

1 reference

Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses

21 January 2018

1 reference

Role of microRNAs and other sRNAs of plants in their changing environments.

21 January 2018

1 reference

Expression-based functional investigation of the organ-specific microRNAs in Arabidopsis

21 January 2018

1 reference

Global analysis of gene-level microRNA expression in Arabidopsis using deep sequencing data

21 January 2018

1 reference

Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins

21 January 2018

1 reference

MIR846 and MIR842 comprise a cistronic MIRNA pair that is regulated by abscisic acid by alternative splicing in roots of Arabidopsis

21 January 2018

1 reference

Transcriptionally and post-transcriptionally regulated microRNAs in heat stress response in barley

21 January 2018

1 reference

Developmentally regulated expression and complex processing of barley pri-microRNAs

21 January 2018

1 reference

A genome-wide characterization of microRNA genes in maize

21 January 2018

1 reference

The liverwort Pellia endiviifolia shares microtranscriptomic traits that are common to green algae and land plants

21 January 2018

1 reference

Common functions for diverse small RNAs of land plants

21 January 2018

1 reference

New insights into pri-miRNA processing and accumulation in plants

21 January 2018

1 reference

A catalogue of splice junction and putative branch point sequences from plant introns

21 January 2018

1 reference

In vitro processing of a plant pre-mRNA in a HeLa cell nuclear extract

21 January 2018

1 reference

Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis

21 January 2018

1 reference

Mutational analysis of a plant branchpoint and polypyrimidine tract required for constitutive splicing of a mini-exon

21 January 2018

1 reference

Alternative splicing of pre-messenger RNAs in plants in the genomic era.

21 January 2018

1 reference

Determinants of plant U12-dependent intron splicing efficiency

21 January 2018

1 reference

The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing.

21 January 2018

1 reference

Differential GC Content between Exons and Introns Establishes Distinct Strategies of Splice-Site Recognition

21 January 2018

1 reference

Spliceosome Structure and Function

21 January 2018

1 reference

The ASRG database: identification and survey of Arabidopsis thaliana genes involved in pre-mRNA splicing

21 January 2018

1 reference

Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression

21 January 2018

1 reference

Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay

21 January 2018

1 reference

Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis

21 January 2018

1 reference

Retained introns increase putative microRNA targets within 3' UTRs of human mRNA.

21 January 2018

1 reference

Non-Canonical Processing of Arabidopsis pri-miR319a/b/c Generates Additional microRNAs to Target One RAP2.12 mRNA Isoform.

21 January 2018

1 reference

Intron retention is a major phenomenon in alternative splicing in Arabidopsis.

21 January 2018

1 reference

Complexity of the alternative splicing landscape in plants.

21 January 2018

1 reference

Alternative splicing in plants: directing traffic at the crossroads of adaptation and environmental stress.

21 January 2018

1 reference

Evolutionary conservation and regulation of particular alternative splicing events in plant SR proteins

21 January 2018

1 reference

The Role of Polypyrimidine Tract-Binding Proteins and Other hnRNP Proteins in Plant Splicing Regulation

21 January 2018

1 reference

The spliceosome-activating complex: molecular mechanisms underlying the function of a pleiotropic regulator

21 January 2018

1 reference

Plant serine/arginine-rich proteins and their role in pre-mRNA splicing

21 January 2018

1 reference

Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.

21 January 2018

1 reference

A role for SR proteins in plant stress responses

21 January 2018

1 reference

Pre-mRNA Splicing in Plants: In Vivo Functions of RNA-Binding Proteins Implicated in the Splicing Process

21 January 2018

1 reference

CDKF;1 and CDKD protein kinases regulate phosphorylation of serine residues in the C-terminal domain of Arabidopsis RNA polymerase II.

21 January 2018

1 reference

Intronic noncoding RNAs and splicing.

21 January 2018

1 reference

Characterization of 43 non-protein-coding mRNA genes in Arabidopsis, including the MIR162a-derived transcripts.

21 January 2018

1 reference

MicroRNA-mediated regulation of stomatal development in Arabidopsis

21 January 2018

1 reference

Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions.

21 January 2018

1 reference

Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs).

21 January 2018

1 reference

In silico identification of conserved microRNAs in large number of diverse plant species

21 January 2018

1 reference

Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation.

21 January 2018

1 reference

Endogenous and silencing-associated small RNAs in plants

21 January 2018

1 reference

Small RNAs correspond to centromere heterochromatic repeats

21 January 2018

1 reference

Control of leaf morphogenesis by microRNAs

21 January 2018

1 reference

Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells

21 January 2018

1 reference

U1 snRNP inhibits pre-mRNA polyadenylation through a direct interaction between U1 70K and poly(A) polymerase

21 January 2018

1 reference

U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation

21 January 2018

1 reference

An active role for splicing in 3'-end formation

21 January 2018

1 reference

U1 snRNP determines mRNA length and regulates isoform expression

21 January 2018

1 reference

Introns of plant pri-miRNAs enhance miRNA biogenesis.

21 January 2018

1 reference

Enhanced microRNA accumulation through stemloop-adjacent introns

21 January 2018

1 reference

Active 5' splice sites regulate the biogenesis efficiency of Arabidopsis microRNAs derived from intron-containing genes

21 January 2018

1 reference

A loop-to-base processing mechanism underlies the biogenesis of plant microRNAs miR319 and miR159.

21 January 2018

1 reference

Sliced microRNA targets and precise loop-first processing of MIR319 hairpins revealed by analysis of the Physcomitrella patens degradome

21 January 2018

1 reference

Multiple RNA recognition patterns during microRNA biogenesis in plants.

21 January 2018

1 reference

Feed-forward microprocessing and splicing activities at a microRNA-containing intron

21 January 2018

1 reference

Biogenesis of intronic miRNAs located in clusters by independent transcription and alternative splicing

21 January 2018

1 reference

Interplay between pre-mRNA splicing and microRNA biogenesis within the supraspliceosome

21 January 2018

1 reference

Chromatin, DNA structure and alternative splicing

21 January 2018

1 reference

Mutual interdependence of splicing and transcription elongation

21 January 2018

1 reference

Co-transcriptional splicing of constitutive and alternative exons

21 January 2018

1 reference

Rates of in situ transcription and splicing in large human genes

21 January 2018

1 reference

Splicing-dependent RNA polymerase pausing in yeast

21 January 2018

1 reference

Global Analysis of Nascent RNA Reveals Transcriptional Pausing in Terminal Exons

21 January 2018

1 reference

Mutation of Arabidopsis spliceosomal timekeeper locus1 causes circadian clock defects

21 January 2018

1 reference

NTR1 is required for transcription elongation checkpoints at alternative exons in Arabidopsis

21 January 2018

1 reference

Primary microRNA transcripts are processed co-transcriptionally.

21 January 2018

1 reference

Microprocessor mediates transcriptional termination of long noncoding RNA transcripts hosting microRNAs

21 January 2018

1 reference

Salt Stress Reveals a New Role for ARGONAUTE1 in miRNA Biogenesis at the Transcriptional and Posttranscriptional Levels

21 January 2018

1 reference

Ago1 Interacts with RNA polymerase II and binds to the promoters of actively transcribed genes in human cancer cells

21 January 2018

1 reference

Argonaute proteins couple chromatin silencing to alternative splicing.

21 January 2018

1 reference

Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cells

21 January 2018

1 reference

AGO1 homeostasis involves differential production of 21-nt and 22-nt miR168 species by MIR168a and MIR168b

21 January 2018

1 reference

AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1

21 January 2018

1 reference

Elongator, a Multisubunit Component of a Novel RNA Polymerase II Holoenzyme for Transcriptional Elongation

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1002/WRNA.1403

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27863087%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

1 reference