(Q39265509)

English

Compromised factor-dependent transcription termination in a nusA mutant of Escherichia coli: spectrum of termination efficiencies generated by perturbations of Rho, NusG, NusA, and H-NS family proteins

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

Compromised factor-dependent transcription termination in a nusA mutant of Escherichia coli: spectrum of termination efficiencies generated by perturbations of Rho, NusG, NusA, and H-NS family proteins (English)

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

Escherichia coli

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author name string

Shivalika Saxena

1

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

J Gowrishankar

2

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

language of work or name

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publication date

20 May 2011

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

Journal of Bacteriology

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

193

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

15

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

3842-3850

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

Modulation of Rho-dependent transcription termination in Escherichia coli by the H-NS family of proteins

1 reference

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10 September 2017

Bacterial transcription terminators: the RNA 3'-end chronicles

1 reference

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10 September 2017

Transcription termination maintains chromosome integrity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Roles for the transcription elongation factor NusA in both DNA repair and damage tolerance pathways in Escherichia coli

1 reference

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10 September 2017

Bacterial nucleoid-associated proteins, nucleoid structure and gene expression

1 reference

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10 September 2017

An allosteric mechanism of Rho-dependent transcription termination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Two Structurally Independent Domains of E. coli NusG Create Regulatory Plasticity via Distinct Interactions with RNA Polymerase and Regulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

RNA polymerase elongation factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

New insights into transcriptional regulation by H-NS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

The novel Hha/YmoA family of nucleoid-associated proteins: use of structural mimicry to modulate the activity of the H-NS family of proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Rho-dependent terminators and transcription termination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Emergent properties of reduced-genome Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Rho-dependent transcription termination: more questions than answers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Structure of a Mycobacterium tuberculosis NusA-RNA complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Bacterial transcription elongation factors: new insights into molecular mechanism of action

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Little lambda, who made thee?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Why is transcription coupled to translation in bacteria?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

H-NS: a universal regulator for a dynamic genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Crystal Structure of NusA from Thermotoga Maritima and Functional Implication of the N-Terminal Domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Rho-dependent termination and ATPases in transcript termination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Transcription termination and anti-termination in E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Crystal structure of the transcription elongation/anti-termination factor NusA from Mycobacterium tuberculosis at 1.7 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

An extended RNA binding surface through arrayed S1 and KH domains in transcription factor NusA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Processive antitermination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Linkage map of Escherichia coli K-12, edition 10: the traditional map

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Probing the structure, function, and interactions of the Escherichia coli H-NS and StpA proteins by using dominant negative derivatives.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Control of rRNA transcription in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Reduced Rho-dependent transcription termination permits NusA-independent growth of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

A general and fast method for mapping mutations on the Escherichia coli chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Transcription terminates at lambda tR1 in three clusters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

L factor that is required for beta-galactosidase synthesis is the nusA gene product involved in transcription termination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

A collection of strains containing genetically linked alternating antibiotic resistance elements for genetic mapping of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Termination efficiency at rho-dependent terminators depends on kinetic coupling between RNA polymerase and rho

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Simultaneous gain and loss of functions caused by a single amino acid substitution in the beta subunit of Escherichia coli RNA polymerase: suppression of nusA and rho mutations and conditional lethality

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Control of Transcription Termination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid

1 reference

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10 September 2017

Linkage map of Escherichia coli K-12, edition 10: the physical map.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

10 September 2017

Termination factor Rho and its cofactors NusA and NusG silence foreign DNA in E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

25 September 2017

The NusA N-terminal domain is necessary and sufficient for enhancement of transcriptional pausing via interaction with the RNA exit channel of RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

17 June 2018

The transcription elongation factor NusA is required for stress-induced mutagenesis in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

17 June 2018

Transcription termination defective mutants of Rho: role of different functions of Rho in releasing RNA from the elongation complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

17 June 2018

Combinatorial effects of NusA and NusG on transcription elongation and Rho-dependent termination in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

17 June 2018

Genetic characterization of a bacterial locus involved in the activity of the N function of phage λ

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

17 June 2018

Rho-dependent transcription termination at lambda R1 requires upstream sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

17 June 2018

Requirement for E. coli NusG protein in factor-dependent transcription termination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

17 June 2018

Interaction surface of the transcription terminator Rho required to form a complex with the C-terminal domain of the antiterminator NusG.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

21 August 2018

Overproduction of the Lon protease triggers inhibition of translation in Escherichia coli: involvement of the yefM-yoeB toxin-antitoxin system

1 reference

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21 August 2018

Activation of Rho-dependent transcription termination by NusG. Dependence on terminator location and acceleration of RNA release

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147515

21 August 2018

Evidence that the KH RNA-binding domains influence the action of the E. coli NusA protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/21602355

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/21602355

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Purification and properties of a soluble factor required for the deoxyribonucleic acid-directed in vitro synthesis of beta-galactosidase

1 reference

https://pubmed.ncbi.nlm.nih.gov/21602355

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The nus mutations affect transcription termination in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/21602355

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulatory defects of a conditionally lethal nusAts mutant of Escherichia coli. Positive and negative modulator roles of NusA protein in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/21602355

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Elongation factor NusG interacts with termination factor rho to regulate termination and antitermination of transcription

1 reference

https://pubmed.ncbi.nlm.nih.gov/21602355

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JB.00221-11

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

10 September 2017

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