(Q39867771)

English

The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolution in the legume family.

scientific article published on 25 April 2014

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scholarly article

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16 March 2020

The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolution in the legume family (English)

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24769537%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

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object named as

Lupinus luteus

1 reference

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Mathieu Rousseau-Gueutin

2

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16 March 2020

author name string

Guillaume E Martin

1

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16 March 2020

Solenn Cordonnier

3

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16 March 2020

Oscar Lima

4

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16 March 2020

Sophie Michon-Coudouel

5

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16 March 2020

Delphine Naquin

6

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16 March 2020

Julie Ferreira de Carvalho

7

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16 March 2020

Malika Aïnouche

8

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16 March 2020

Armel Salmon

9

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16 March 2020

Abdelkader Aïnouche

10

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16 March 2020

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publication date

25 April 2014

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16 March 2020

number of pages

14

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Annals of Botany

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16 March 2020

113

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16 March 2020

7

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16 March 2020

1197-1210

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16 March 2020

Capturing the biofuel wellhead and powerhouse: the chloroplast and mitochondrial genomes of the leguminous feedstock tree Pongamia pinnata

1 reference

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22 September 2017

Revisiting the phylogeny of papilionoid legumes: New insights from comprehensively sampled early-branching lineages

1 reference

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22 September 2017

A phylogeny of legumes (Leguminosae) based on analysis of the plastid matK gene resolves many well-supported subclades within the family.

1 reference

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22 September 2017

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1 reference

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Localized hypermutation and associated gene losses in legume chloroplast genomes

1 reference

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1 reference

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Recombination and the maintenance of plant organelle genome stability.

1 reference

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1 reference

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1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

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22 September 2017

Using plastid genome-scale data to resolve enigmatic relationships among basal angiosperms

1 reference

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22 September 2017

Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns

1 reference

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22 September 2017

Rapid evolutionary change of common bean (Phaseolus vulgaris L) plastome, and the genomic diversification of legume chloroplasts

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22 September 2017

Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus

1 reference

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22 September 2017

PAML 4: phylogenetic analysis by maximum likelihood

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Evolving ideas of legume evolution and diversity: a taxonomic perspective on the occurrence of nodulation

1 reference

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Gene Relocations within Chloroplast Genomes of Jasminum and Menodora (Oleaceae) Are Due to Multiple, Overlapping Inversions

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22 September 2017

Tobacco plastid ribosomal protein S18 is essential for cell survival

1 reference

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22 September 2017

BaCelLo: a balanced subcellular localization predictor

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22 September 2017

Island radiation on a continental scale: exceptional rates of plant diversification after uplift of the Andes

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22 September 2017

A chloroplast DNA inversion marks an ancient evolutionary split in the sunflower family (Asteraceae)

1 reference

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22 September 2017

Legume comparative genomics: progress in phylogenetics and phylogenomics.

1 reference

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22 September 2017

ChloroplastDB: the Chloroplast Genome Database

1 reference

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22 September 2017

Complete chloroplast genome sequence of Gycine max and comparative analyses with other legume genomes

1 reference

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22 September 2017

The Chloroplast Genome Sequence of the Green Alga Pseudendoclonium akinetum (Ulvophyceae) Reveals Unusual Structural Features and New Insights into the Branching Order of Chlorophyte Lineages

1 reference

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22 September 2017

Conglutin gamma, a lupin seed protein, binds insulin in vitro and reduces plasma glucose levels of hyperglycemic rats.

1 reference

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22 September 2017

Chloroplast DNA rearrangements in Campanulaceae: phylogenetic utility of highly rearranged genomes

1 reference

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22 September 2017

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

1 reference

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22 September 2017

Automatic annotation of organellar genomes with DOGMA

1 reference

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22 September 2017

Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes

1 reference

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22 September 2017

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

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22 September 2017

Carbohydrate fractions of legumes: uses in human nutrition and potential for health

1 reference

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22 September 2017

REPuter: the manifold applications of repeat analysis on a genomic scale

1 reference

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22 September 2017

Complete Structure of the Chloroplast Genome of a Legume, Lotus japonicus

1 reference

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22 September 2017

Chloroplast DNA inversion polymorphism in populations of Abies and Tsuga

1 reference

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22 September 2017

Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

1 reference

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22 September 2017

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

1 reference

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Targeted inactivation of a tobacco intron-containing open reading frame reveals a novel chloroplast-encoded photosystem I-related gene

1 reference

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22 September 2017

The distribution and phylogenetic significance of a 50-kb chloroplast DNA inversion in the flowering plant family Leguminosae

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22 September 2017

Rates and patterns of chloroplast DNA evolution

1 reference

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22 September 2017

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1 reference

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22 September 2017

Chloroplast DNA rearrangements are more frequent when a large inverted repeat sequence is lost

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4030815

22 September 2017

Comparative organization of chloroplast genomes

1 reference

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22 September 2017

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22 September 2017

Transfer of rpl22 to the nucleus greatly preceded its loss from the chloroplast and involved the gain of an intron.

1 reference

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25 September 2017

Complete plastid genome sequence of the chickpea (Cicer arietinum) and the phylogenetic distribution of rps12 and clpP intron losses among legumes (Leguminosae).

1 reference

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17 June 2018

The two largest chloroplast genome-encoded open reading frames of higher plants are essential genes.

1 reference

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Episodic adaptive evolution of primate lysozymes.

1 reference

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17 June 2018

Preponderance of synonymous changes as evidence for the neutral theory of molecular evolution

1 reference

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17 June 2018

Isolation, phylogeny and evolution of the SymRK gene in the legume genus Lupinus L.

1 reference

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20 August 2018

Diversification of Lupinus (Leguminosae) in the western New World: derived evolution of perennial life history and colonization of montane habitats

1 reference

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20 August 2018

Gepard: a rapid and sensitive tool for creating dotplots on genome scale.

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20 August 2018

Two chloroplast DNA inversions originated simultaneously during the early evolution of the sunflower family (Asteraceae).

1 reference

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20 August 2018

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20 August 2018

Evaluation of pesticide uptake by Lupinus seeds

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20 August 2018

Evolutionary re-organisation of a large operon in adzuki bean chloroplast DNA caused by inverted repeat movement.

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20 August 2018

The Chlamydomonas reinhardtii plastid chromosome: islands of genes in a sea of repeats

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20 August 2018

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1 reference

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20 August 2018

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

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21 January 2018

Evolutionary Significance of the Loss of the Chloroplast-DNA Inverted Repeat in the Leguminosae Subfamily Papilionoideae

1 reference

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21 January 2018

Many Parallel Losses of infA from Chloroplast DNA during Angiosperm Evolution with Multiple Independent Transfers to the Nucleus

1 reference

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21 January 2018

Lupin protein attenuates the development of hypertension and normalises the vascular function of NaCl-loaded Goto-Kakizaki rats

1 reference

https://pubmed.ncbi.nlm.nih.gov/24769537

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Presence of a latent mitochondrial targeting signal in gene on mitochondrial genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/24769537

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extensive reorganization of the plastid genome of Trifolium subterraneum (Fabaceae) is associated with numerous repeated sequences and novel DNA insertions

1 reference

https://pubmed.ncbi.nlm.nih.gov/24769537

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

EVOLUTIONARY SIGNIFICANCE OF THE LOSS OF THE CHLOROPLAST-DNA INVERTED REPEAT IN THE LEGUMINOSAE SUBFAMILY PAPILIONOIDEAE.

1 reference

https://pubmed.ncbi.nlm.nih.gov/24769537

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/24769537

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/AOB/MCU050

1 reference

Europe PubMed Central

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16 March 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24769537%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24769537%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

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