(Q39942814)

15 September 2017

An uncharged amine in the transition state of the ribosomal peptidyl transfer reaction (English)

1 reference

15 September 2017

Rebecca M Voorhees

3

0 references

Kensuke Okuda

object named as

Kensuke Okuda

4

0 references

Marina Rodnina

object named as

Marina V Rodnina

7

0 references

Emmanuel Pfund

object named as

Emmanuel Pfund

2

0 references

author name string

David A Kingery

1

1 reference

15 September 2017

Ingo Wohlgemuth

5

1 reference

15 September 2017

David E Kitchen

6

1 reference

15 September 2017

Scott A Strobel

8

1 reference

15 September 2017

1 May 2008

1 reference

15 September 2017

Chemistry and Biology

1 reference

15 September 2017

15

1 reference

15 September 2017

5

1 reference

15 September 2017

493-500

1 reference

How ribosomes make peptide bonds

15 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Mechanism of peptide bond formation on the ribosome

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Rapid peptide bond formation on isolated 50S ribosomal subunits

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

An induced-fit mechanism to promote peptide bond formation and exclude hydrolysis of peptidyl-tRNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Mechanism of peptide bond synthesis on the ribosome

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

The ribosome as an entropy trap

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Mononucleotide derivatives as ribosomal P-site substrates reveal an important contribution of the 2'-OH to activity

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Molecular aspects of the ribosomal peptidyl transferase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

The structural basis of ribosome activity in peptide bond synthesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Thiostrepton inhibits the turnover but not the GTPase of elongation factor G on the ribosome.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

GTP consumption of elongation factor Tu during translation of heteropolymeric mRNAs

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Do cleavages of amides by serine proteases occur through a stepwise pathway involving tetrahedral intermediates?

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

The mechanism of the aminolysis of acetate esters.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Essential mechanisms in the catalysis of peptide bond formation on the ribosome.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Structural insights into the roles of water and the 2' hydroxyl of the P site tRNA in the peptidyl transferase reaction

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Uncovering the enzymatic pKa of the ribosomal peptidyl transferase reaction utilizing a fluorinated puromycin derivative

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

2'/3'-O-peptidyl adenosine as a general base catalyst of its own external peptidyl transfer: implications for the ribosome catalytic mechanism

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Kinetic isotope effect analysis of the ribosomal peptidyl transferase reaction

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Substrate-assisted catalysis of peptide bond formation by the ribosome

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

THE REACTIVITY OF NUCLEOPHILIC REAGENTS WITH FUROYL-CHYMOTRYPSIN

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

Important contribution to catalysis of peptide bond formation by a single ionizing group within the ribosome.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851197

A single adenosine with a neutral pKa in the ribosomal peptidyl transferase center

20 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18482701

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Transition state charge distribution in reactions of an acetyltyrosylchymotrypsin intermediate

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18482701

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A possible mechanism of peptide bond formation on ribosome without mediation of peptidyl transferase

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18482701

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CHEMBIOL.2008.04.005

1 reference

15 September 2017

1 reference

15 September 2017

1 reference