(Q40039830)

29 September 2017

Methods for enhancing the reproducibility of biomedical research findings using electronic health records (English)

1 reference

electronic health records

29 September 2017

1 reference

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Kenan Direk

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Maria Pikoula

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Sera Aylin Cakiroglu

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

Arturo Gonzalez-Izquierdo

13 June 2020

object named as

Arturo Gonzalez-Izquierdo

3

0 references

Harry Hemingway

object named as

Harry Hemingway

7

0 references

Liam Smeeth

object named as

Liam Smeeth

8

0 references

author name string

Jason Moore

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

publication date

11 September 2017

1 reference

29 September 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

volume

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

page(s)

31

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

13 June 2020

Jupyter notebook file

1 reference

1 reference

26 June 2022

https://europepmc.org/article/PMC/PMC5594436

inferred from PubMed Central ID database lookup

electronic health records

1 reference

https://scigraph.springernature.com/pub.10.1186/s13040-017-0151-7

inferred from title

exact match

0 references

cites work

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Reproducibility of computational workflows is automated using continuous analysis

1 October 2017

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1 October 2017

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rEHR: An R package for manipulating and analysing Electronic Health Record data

1 October 2017

1 reference

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Ten Simple Rules for Developing Usable Software in Computational Biology

1 October 2017

1 reference

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Prognostic burden of heart failure recorded in primary care, acute hospital admissions, or both: a population-based linked electronic health record cohort study in 2.1 million people

1 October 2017

1 reference

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Evolution of primary care databases in UK: a scientometric analysis of research output

1 October 2017

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Prolonged dual antiplatelet therapy in stable coronary disease: comparative observational study of benefits and harms in unselected versus trial populations

1 October 2017

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What does research reproducibility mean?

1 October 2017

1 reference

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MIMIC-III, a freely accessible critical care database

1 October 2017

1 reference

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A "datathon" model to support cross-disciplinary collaboration

1 October 2017

1 reference

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From the desktop to the grid: scalable bioinformatics via workflow conversion

1 October 2017

1 reference

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Reproducible Research Practices and Transparency across the Biomedical Literature

1 October 2017

1 reference

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The REporting of studies Conducted using Observational Routinely-collected health Data (RECORD) statement

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Desiderata for computable representations of electronic health records-driven phenotype algorithms

1 October 2017

1 reference

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UK biobank: an open access resource for identifying the causes of a wide range of complex diseases of middle and old age

1 October 2017

1 reference

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A new initiative on precision medicine

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Reproducibility in science: improving the standard for basic and preclinical research

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Type 2 diabetes and incidence of cardiovascular diseases: a cohort study in 1·9 million people

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Virtual Reference Environments: a simple way to make research reproducible.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

ClinicalCodes: an online clinical codes repository to improve the validity and reproducibility of research using electronic medical records

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Blood pressure and incidence of twelve cardiovascular diseases: lifetime risks, healthy life-years lost, and age-specific associations in 1·25 million people

1 October 2017

1 reference

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Finding the missing link for big biomedical data

1 October 2017

1 reference

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All hail reproducibility in microbiome research

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Prognostic models for stable coronary artery disease based on electronic health record cohort of 102 023 patients.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Ten simple rules for reproducible computational research

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

The Electronic Medical Records and Genomics (eMERGE) Network: past, present, and future

1 October 2017

1 reference

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The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud

1 October 2017

1 reference

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Validation of electronic medical record-based phenotyping algorithms: results and lessons learned from the eMERGE network

1 October 2017

1 reference

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Applying semantic web technologies for phenome-wide scan using an electronic health record linked Biobank

1 October 2017

1 reference

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Ten simple rules for the open development of scientific software

1 October 2017

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Data resource profile: cardiovascular disease research using linked bespoke studies and electronic health records (CALIBER)

1 October 2017

1 reference

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Next-generation phenotyping of electronic health records

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Snakemake--a scalable bioinformatics workflow engine

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Reproducible computational biology experiments with SED-ML--the Simulation Experiment Description Markup Language

1 October 2017

1 reference

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Genetic variants associated with the white blood cell count in 13,923 subjects in the eMERGE Network

1 October 2017

1 reference

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Electronic medical records for genetic research: results of the eMERGE consortium

1 October 2017

1 reference

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Advancing standards for bioinformatics activities: persistence, reproducibility, disambiguation and Minimum Information About a Bioinformatics investigation (MIABi).

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Biopython: freely available Python tools for computational molecular biology and bioinformatics

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Chaste: using agile programming techniques to develop computational biology software

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Galaxy: a platform for interactive large-scale genome analysis

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Why most published research findings are false

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Seasonal analyses of air pollution and mortality in 100 US cities

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Bioconductor: open software development for computational biology and bioinformatics

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

The tip of the iceberg: challenges of accessing hospital electronic health record data for biological data mining

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

The Strengthening the Reporting of Observational Studies in Epidemiology (STROBE) Statement: guidelines for reporting observational studies.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Computer science. Accessible reproducible research

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Reproducible research and Biostatistics

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5594436

Big biomedical data and cardiovascular disease research: opportunities and challenges.

1 October 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13040-017-0151-7

On the criteria to be used in decomposing systems into modules

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13040-017-0151-7

Formal methods: state of the art and future directions

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13040-017-0151-7

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13040-017-0151-7

Automated Capture of Experiment Context for Easier Reproducibility in Computational Research

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13040-017-0151-7

Towards an operationalization of test-driven development skills: An industrial empirical study

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13040-017-0151-7

Creating a bioinformatics nation

21 January 2018

1 reference

12 December 2020

SNOMED-CT: The advanced terminology and coding system for eHealth

1 reference

12 December 2020

Big data from electronic health records for early and late translational cardiovascular research: challenges and potential.

1 reference

12 December 2020

Evaluation of Semantic Web Technologies for Storing Computable Definitions of Electronic Health Records Phenotyping Algorithms.

1 reference

12 December 2020

10.1186/S13040-017-0151-7

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

journals/biodatamining/DenaxasDGPCMHS17

13 June 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28912836%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

1 reference