(Q40044568)

28 September 2017

Structural insights into the Middle East respiratory syndrome coronavirus 4a protein and its dsRNA binding mechanism (English)

1 reference

Middle East respiratory syndrome coronavirus

28 September 2017

0 references

Middle East

0 references

Middle East respiratory syndrome

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Mahesh Chandra Patra

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

author name string

Masaud Shah

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Dhanusha Yesudhas

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Sangdun Choi

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

language of work or name

English

0 references

publication date

12 September 2017

1 reference

28 September 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

page(s)

11362

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

13 June 2020

copyright license

start time

12 September 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/s41598-017-11736-6

0 references

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Computational modeling of the bat HKU4 coronavirus 3CL(pro) inhibitors as a tool for the development of antivirals against the emerging Middle East respiratory syndrome (MERS) coronavirus

28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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Alisporivir inhibits MERS- and SARS-coronavirus replication in cell culture, but not SARS-coronavirus infection in a mouse model

28 September 2017

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28 September 2017

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A recombinant receptor-binding domain of MERS-CoV in trimeric form protects human dipeptidyl peptidase 4 (hDPP4) transgenic mice from MERS-CoV infection

28 September 2017

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Toward Developing a Preventive MERS-CoV Vaccine-Report from a Workshop Organized by the Saudi Arabia Ministry of Health and the International Vaccine Institute, Riyadh, Saudi Arabia, November 14-15, 2015.

28 September 2017

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Vaccines for the prevention against the threat of MERS-CoV.

28 September 2017

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MMPBSA.py: An Efficient Program for End-State Free Energy Calculations

28 September 2017

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Middle East respiratory syndrome coronavirus: transmission, virology and therapeutic targeting to aid in outbreak control

28 September 2017

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In silico mechanistic analysis of IRF3 inactivation and high-risk HPV E6 species-dependent drug response

28 September 2017

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Best bang for your buck: GPU nodes for GROMACS biomolecular simulations.

28 September 2017

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Control of adaptive immunity by the innate immune system

28 September 2017

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Successful recovery of MERS CoV pneumonia in a patient with acquired immunodeficiency syndrome: a case report

28 September 2017

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Influenza virus non-structural protein NS1: interferon antagonism and beyond.

28 September 2017

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Middle east respiratory syndrome coronavirus 4a protein is a double-stranded RNA-binding protein that suppresses PACT-induced activation of RIG-I and MDA5 in the innate antiviral response.

28 September 2017

1 reference

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The ORF4b-encoded accessory proteins of Middle East respiratory syndrome coronavirus and two related bat coronaviruses localize to the nucleus and inhibit innate immune signalling

28 September 2017

1 reference

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The structural and accessory proteins M, ORF 4a, ORF 4b, and ORF 5 of Middle East respiratory syndrome coronavirus (MERS-CoV) are potent interferon antagonists

28 September 2017

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Strategies of highly pathogenic RNA viruses to block dsRNA detection by RIG-I-like receptors: hide, mask, hit.

28 September 2017

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Principal component analysis: a method for determining the essential dynamics of proteins

28 September 2017

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Emergence of the Middle East respiratory syndrome coronavirus

28 September 2017

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Middle East respiratory syndrome coronavirus accessory protein 4a is a type I interferon antagonist

28 September 2017

1 reference

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Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment

28 September 2017

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Cytosolic sensing of viruses

28 September 2017

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Cell host response to infection with novel human coronavirus EMC predicts potential antivirals and important differences with SARS coronavirus

28 September 2017

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Tropism of and innate immune responses to the novel human betacoronavirus lineage C virus in human ex vivo respiratory organ cultures

28 September 2017

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Dipeptidyl peptidase 4 is a functional receptor for the emerging human coronavirus-EMC

28 September 2017

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Human cell tropism and innate immune system interactions of human respiratory coronavirus EMC compared to those of severe acute respiratory syndrome coronavirus

28 September 2017

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Efficient replication of the novel human betacoronavirus EMC on primary human epithelium highlights its zoonotic potential

28 September 2017

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GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit

28 September 2017

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Human coronavirus EMC does not require the SARS-coronavirus receptor and maintains broad replicative capability in mammalian cell lines

28 September 2017

1 reference

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Genomic characterization of a newly discovered coronavirus associated with acute respiratory distress syndrome in humans

28 September 2017

1 reference

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RNA recognition by double-stranded RNA binding domains: a matter of shape and sequence

28 September 2017

1 reference

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Homology modeling of an antifungal metabolite plipastatin synthase from the Bacillus subtilis 168.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

A fresh look at the Ramachandran plot and the occurrence of standard structures in proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Inhibition of the type I interferon response in human dendritic cells by dengue virus infection requires a catalytically active NS2B3 complex

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

PROSESS: a protein structure evaluation suite and server

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Murine coronavirus induces type I interferon in oligodendrocytes through recognition by RIG-I and MDA5.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Improved side-chain torsion potentials for the Amber ff99SB protein force field

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

I-TASSER: a unified platform for automated protein structure and function prediction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

QMEAN server for protein model quality estimation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Protein structure prediction on the Web: a case study using the Phyre server

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Principal component analysis for protein folding dynamics

28 September 2017

1 reference

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Thr729 in human topoisomerase I modulates anti-cancer drug resistance by altering protein domain communications as suggested by molecular dynamics simulations

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Structural Basis of Toll-Like Receptor 3 Signaling with Double-Stranded RNA

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Evaluating protein structures determined by structural genomics consortia

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Pathogen recognition and innate immunity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Anti-immunology: evasion of the host immune system by bacterial and viral pathogens

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Immunopathogenesis of coronavirus infections: implications for SARS.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

TM-align: a protein structure alignment algorithm based on the TM-score

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

UCSF Chimera--a visualization system for exploratory research and analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Geometry and symmetry presculpt the free-energy landscape of proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

SWISS-MODEL: An automated protein homology-modeling server

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Basic local alignment search tool

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Assessing the performance of the molecular mechanics/Poisson Boltzmann surface area and molecular mechanics/generalized Born surface area methods. II. The accuracy of ranking poses generated from docking

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

CPHmodels-3.0--remote homology modeling using structure-guided sequence profiles

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

HexServer: an FFT-based protein docking server powered by graphics processors.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Intermediate states of ribonuclease III in complex with double-stranded RNA.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Dynamics of Gal80p in the Gal80p-Gal3p complex differ significantly from the dynamics in the Gal80p-Gal1p complex: implications for the higher specificity of Gal3p.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

g_mmpbsa--a GROMACS tool for high-throughput MM-PBSA calculations.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Optimizing working parameters of the smooth particle mesh Ewald algorithm in terms of accuracy and efficiency.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Structure-based method for analyzing protein-protein interfaces

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5596018

Comparative Protein Structure Modeling Using MODELLER

20 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41598-017-11736-6

inferred from DOI database lookup

7 January 2021

based on heuristic

Use of MATHEMATICA software for theoretical analysis of linear sweep voltammograms

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41598-017-11736-6

inferred from DOI database lookup

7 January 2021

based on heuristic

Free Energy Calculations by the Molecular Mechanics Poisson-Boltzmann Surface Area Method

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41598-017-11736-6

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/S41598-017-11736-6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28900197%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

PubMed publication ID

28900197

1 reference