(Q40100649)

17 September 2017

RNA-mediated signal perception in pathogenic bacteria (English)

1 reference

17 September 2017

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28792118%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Jörgen Johansson

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28792118%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

author name string

Dmitriy Ignatov

series ordinal

1

1 reference

17 September 2017

Jörgen Johansson

series ordinal

2

1 reference

17 September 2017

9 August 2017

1 reference

Wiley interdisciplinary reviews. RNA

17 September 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28792118%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

volume

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28792118%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28792118%20AND%20SRC:MED&resulttype=core&format=json

Listeria monocytogenes mutants that fail to compartmentalize listerolysin O activity are cytotoxic, avirulent, and unable to evade host extracellular defenses

9 June 2020

cites work

1 reference

Ectopic expression of the flagellar regulon alters development of the Bordetella-host interaction

21 January 2018

1 reference

CovS/CovR of group B streptococcus: a two-component global regulatory system involved in virulence

21 January 2018

1 reference

Regulation of virulence by a two-component system in group B streptococcus

21 January 2018

1 reference

Activation of the RcsC/YojN/RcsB phosphorelay system attenuates Salmonella virulence

21 January 2018

1 reference

RNAs: regulators of bacterial virulence

21 January 2018

1 reference

RNA-mediated regulation in pathogenic bacteria

21 January 2018

1 reference

Regulation of pathogenicity by noncoding RNAs in bacteria

21 January 2018

1 reference

Non-coding RNA regulation in pathogenic bacteria located inside eukaryotic cells.

21 January 2018

1 reference

Small RNAs, 5' UTR elements and RNA-binding proteins in intracellular bacteria: impact on metabolism and virulence

21 January 2018

1 reference

Regulation by small RNAs in bacteria: expanding frontiers

21 January 2018

1 reference

Genetic control by metabolite-binding riboswitches

21 January 2018

1 reference

Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline

21 January 2018

1 reference

Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes

21 January 2018

1 reference

Riboswitches that sense S-adenosylmethionine and S-adenosylhomocysteine

21 January 2018

1 reference

Riboswitches in eubacteria sense the second messenger cyclic di-GMP

21 January 2018

1 reference

An allosteric self-splicing ribozyme triggered by a bacterial second messenger

21 January 2018

1 reference

Sensing Small Molecules by Nascent RNA

21 January 2018

1 reference

Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression

21 January 2018

1 reference

An mRNA structure that controls gene expression by binding FMN

21 January 2018

1 reference

Genetic control by a metabolite binding mRNA

21 January 2018

1 reference

A eubacterial riboswitch class that senses the coenzyme tetrahydrofolate

21 January 2018

1 reference

The riboswitch-mediated control of sulfur metabolism in bacteria

21 January 2018

1 reference

Transcription termination control of the S box system: direct measurement of S-adenosylmethionine by the leader RNA.

21 January 2018

1 reference

Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria

21 January 2018

1 reference

The S(MK) box is a new SAM-binding RNA for translational regulation of SAM synthetase

21 January 2018

1 reference

The aptamer core of SAM-IV riboswitches mimics the ligand-binding site of SAM-I riboswitches

21 January 2018

1 reference

A variant riboswitch aptamer class for S-adenosylmethionine common in marine bacteria

21 January 2018

1 reference

Riboswitches that sense S-adenosylhomocysteine and activate genes involved in coenzyme recycling

21 January 2018

1 reference

A widespread riboswitch candidate that controls bacterial genes involved in molybdenum cofactor and tungsten cofactor metabolism

21 January 2018

1 reference

Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria

21 January 2018

1 reference

Adenine riboswitches and gene activation by disruption of a transcription terminator

21 January 2018

1 reference

Guanine riboswitch variants from Mesoplasma florum selectively recognize 2'-deoxyguanosine

21 January 2018

1 reference

GEMM-I riboswitches from Geobacter sense the bacterial second messenger cyclic AMP-GMP

21 January 2018

1 reference

A riboswitch selective for the queuosine precursor preQ1 contains an unusually small aptamer domain

21 January 2018

1 reference

Confirmation of a second natural preQ1 aptamer class in Streptococcaceae bacteria

21 January 2018

1 reference

An ancient riboswitch class in bacteria regulates purine biosynthesis and one-carbon metabolism

21 January 2018

1 reference

The L box regulon: Lysine sensing by leader RNAs of bacterial lysine biosynthesis genes

21 January 2018

1 reference

An mRNA structure in bacteria that controls gene expression by binding lysine

21 January 2018

1 reference

A glycine-dependent riboswitch that uses cooperative binding to control gene expression

21 January 2018

1 reference

Bacterial aptamers that selectively bind glutamine

21 January 2018

1 reference

An RNA sensor for intracellular Mg(2+).

21 January 2018

1 reference

Structure and mechanism of a metal-sensing regulatory RNA

21 January 2018

1 reference

Mn(2+)-sensing mechanisms of yybP-ykoY orphan riboswitches

21 January 2018

1 reference

Widespread genetic switches and toxicity resistance proteins for fluoride

21 January 2018

1 reference

Bacterial riboswitches cooperatively bind Ni(2+) or Co(2+) ions and control expression of heavy metal transporters.

21 January 2018

1 reference

Control of gene expression by a natural metabolite-responsive ribozyme

21 January 2018

1 reference

Metabolism of Free Guanidine in Bacteria Is Regulated by a Widespread Riboswitch Class.

21 January 2018

1 reference

The yjdF riboswitch candidate regulates gene expression by binding diverse azaaromatic compounds

21 January 2018

1 reference

The distributions, mechanisms, and structures of metabolite-binding riboswitches

21 January 2018

1 reference

The purine efflux pump PbuE in Bacillus subtilis modulates expression of the PurR and G-box (XptR) regulons by adjusting the purine base pool size

21 January 2018

1 reference

Riboswitch control of Rho-dependent transcription termination

21 January 2018

1 reference

Conformational capture of the SAM-II riboswitch

21 January 2018

1 reference

Comparative study between transcriptionally- and translationally-acting adenine riboswitches reveals key differences in riboswitch regulatory mechanisms

21 January 2018

1 reference

The kinetics of ligand binding by an adenine-sensing riboswitch

21 January 2018

1 reference

Quantitative and predictive model of kinetic regulation by E. coli TPP riboswitches

21 January 2018

1 reference

Ribozymes and riboswitches: modulation of RNA function by small molecules

21 January 2018

1 reference

The SAM-responsive S(MK) box is a reversible riboswitch

21 January 2018

1 reference

Transcriptional pausing at the translation start site operates as a critical checkpoint for riboswitch regulation

21 January 2018

1 reference

Dual-acting riboswitch control of translation initiation and mRNA decay

21 January 2018

1 reference

The glmS ribozyme cofactor is a general acid-base catalyst

21 January 2018

1 reference

Mechanism of mRNA destabilization by the glmS ribozyme

21 January 2018

1 reference

A conserved RNA structure element involved in the regulation of bacterial riboflavin synthesis genes

21 January 2018

1 reference

The S box regulon: a new global transcription termination control system for methionine and cysteine biosynthesis genes in gram-positive bacteria

21 January 2018

1 reference

A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria

21 January 2018

1 reference

Adenosylcobalamin inhibits ribosome binding to btuB RNA

21 January 2018

1 reference

An adenosyl-cobalamin (coenzyme-B12)-repressed translational enhancer in the cob mRNA of Salmonella typhimurium.

21 January 2018

1 reference

Do mRNAs act as direct sensors of small molecules to control their expression?

21 January 2018

1 reference

Oligonucleotide aptamers that recognize small molecules

21 January 2018

1 reference

Relationship between internucleotide linkage geometry and the stability of RNA.

21 January 2018

1 reference

An mRNA structure that controls gene expression by binding S-adenosylmethionine

21 January 2018

1 reference

Riboswitches in eubacteria sense the second messenger c-di-AMP

21 January 2018

1 reference

New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control

21 January 2018

1 reference

A computational pipeline for high- throughput discovery of cis-regulatory noncoding RNA in prokaryotes

21 January 2018

1 reference

Finding non-coding RNAs through genome-scale clustering.

21 January 2018

1 reference

A Structural Basis for the Recognition of 2′-Deoxyguanosine by the Purine Riboswitch

21 January 2018

1 reference

Structure and dynamics of the deoxyguanosine-sensing riboswitch studied by NMR-spectroscopy

21 January 2018

1 reference

Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria

21 January 2018

1 reference

Genome-Wide Analysis of RNA Secondary Structure

21 January 2018

1 reference

Temperature-responsive in vitro RNA structurome of Yersinia pseudotuberculosis

21 January 2018

1 reference

In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features.

21 January 2018

1 reference

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo

21 January 2018

1 reference

Mod-seq: high-throughput sequencing for chemical probing of RNA structure

21 January 2018

1 reference

Structural imprints in vivo decode RNA regulatory mechanisms

21 January 2018

1 reference

Themes and variations in riboswitch structure and function.

21 January 2018

1 reference

A jack of all trades: the multiple roles of the unique essential second messenger cyclic di-AMP.

21 January 2018

1 reference

21 January 2018

1 reference

Mycobacterium tuberculosis: success through dormancy

21 January 2018

1 reference

Nucleotide second messenger-mediated regulation of a muralytic enzyme in Streptomyces.

21 January 2018

1 reference

Principles of c-di-GMP signalling in bacteria

21 January 2018

1 reference

Cyclic diguanylate regulates Vibrio cholerae virulence gene expression

21 January 2018

1 reference

Analysis of Pseudomonas aeruginosa diguanylate cyclases and phosphodiesterases reveals a role for bis-(3'-5')-cyclic-GMP in virulence

21 January 2018

1 reference

Analysis of the Borrelia burgdorferi cyclic-di-GMP-binding protein PlzA reveals a role in motility and virulence

21 January 2018

1 reference

The RNA Domain Vc1 Regulates Downstream Gene Expression in Response to Cyclic Diguanylate in Vibrio cholerae

21 January 2018

1 reference

A colonization factor links Vibrio cholerae environmental survival and human infection

21 January 2018

1 reference

The Vibrio cholerae Colonization Factor GbpA Possesses a Modular Structure that Governs Binding to Different Host Surfaces

21 January 2018

1 reference

Intestinal adherence of Vibrio cholerae involves a coordinated interaction between colonization factor GbpA and mucin

21 January 2018

1 reference

Cyclic di-GMP contributes to adaption and virulence of Bacillus thuringiensis through a riboswitch-regulated collagen adhesion protein

21 January 2018

1 reference

Clostridium difficile colitis: pathogenesis and host defence

21 January 2018

1 reference

Cyclic diguanylate inversely regulates motility and aggregation in Clostridium difficile

21 January 2018

1 reference

Cyclic di-GMP riboswitch-regulated type IV pili contribute to aggregation of Clostridium difficile

21 January 2018

1 reference

Regulation of Type IV Pili Contributes to Surface Behaviors of Historical and Epidemic Strains of Clostridium difficile

21 January 2018

1 reference

Clostridium difficile infection: toxins and non-toxin virulence factors, and their contributions to disease establishment and host response

21 January 2018

1 reference

A novel secreted metalloprotease (CD2830) from Clostridium difficile cleaves specific proline sequences in LPXTG cell surface proteins

21 January 2018

1 reference

Cyclic diGMP regulates production of sortase substrates of Clostridium difficile and their surface exposure through ZmpI protease-mediated cleavage

21 January 2018

1 reference

Illuminating the landscape of host-pathogen interactions with the bacterium Listeria monocytogenes

21 January 2018

1 reference

Propanediol utilization genes (pdu) of Salmonella typhimurium: three genes for the propanediol dehydratase

21 January 2018

1 reference

A riboswitch-regulated antisense RNA in Listeria monocytogenes

21 January 2018

1 reference

Riboswitches. A riboswitch-containing sRNA controls gene expression by sequestration of a response regulator.

21 January 2018

1 reference

Riboswitches. Sequestration of a two-component response regulator by a riboswitch-regulated noncoding RNA.

21 January 2018

1 reference

Antibacterial lysine analogs that target lysine riboswitches.

21 January 2018

1 reference

Design and antimicrobial action of purine analogues that bind Guanine riboswitches

21 January 2018

1 reference

Novel riboswitch ligand analogs as selective inhibitors of guanine-related metabolic pathways

21 January 2018

1 reference

Structural and Biochemical Characterization of Linear Dinucleotide Analogues Bound to the c-di-GMP-I Aptamer

21 January 2018

1 reference

Identification of ligand analogues that control c-di-GMP riboswitches.

21 January 2018

1 reference

Differential analogue binding by two classes of c-di-GMP riboswitches

21 January 2018

1 reference

Probing riboswitch-ligand interactions using thiamine pyrophosphate analogues.

21 January 2018

1 reference

Novel riboswitch-binding flavin analog that protects mice against Clostridium difficile infection without inhibiting cecal flora

21 January 2018

1 reference

Development and application of a high-throughput assay for glmS riboswitch activators

21 January 2018

1 reference

High-throughput-compatible assay for glmS riboswitch metabolite dependence

21 January 2018

1 reference

Selective small-molecule inhibition of an RNA structural element

21 January 2018

1 reference

Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5'-UTR

21 January 2018

1 reference

Thiamine pyrophosphate riboswitches are targets for the antimicrobial compound pyrithiamine

21 January 2018

1 reference

Roseoflavin is a natural antibacterial compound that binds to FMN riboswitches and regulates gene expression

21 January 2018

1 reference

The RFN riboswitch of Bacillus subtilis is a target for the antibiotic roseoflavin produced by Streptomyces davawensis

21 January 2018

1 reference

The riboflavin analog roseoflavin targets an FMN-riboswitch and blocks Listeria monocytogenes growth, but also stimulates virulence gene-expression and infection

21 January 2018

1 reference

Mechanisms of resistance to an amino acid antibiotic that targets translation

21 January 2018

1 reference

Metabolite-binding RNA domains are present in the genes of eukaryotes

21 January 2018

1 reference

Three thiamine analogues differently alter thiamine transport and metabolism in nervous tissue: an in vivo kinetic study using rats.

21 January 2018

1 reference

Characterization of riboflavin (vitamin B2) transport proteins from Bacillus subtilis and Corynebacterium glutamicum

21 January 2018

1 reference

Flavoproteins are potential targets for the antibiotic roseoflavin in Escherichia coli

21 January 2018

1 reference

The flavoenzyme azobenzene reductase AzoR from Escherichia coli binds roseoflavin mononucleotide (RoFMN) with high affinity and is less active in its RoFMN form.

21 January 2018

1 reference

The antibiotics roseoflavin and 8-demethyl-8-amino-riboflavin from Streptomyces davawensis are metabolized by human flavokinase and human FAD synthetase.

21 January 2018

1 reference

Induction of gene mutation in and cell transformation of mammalian cells by modified purines: 2-aminopurine and 6-N-hydroxylaminopurine

21 January 2018

1 reference

The genetic activity of N6-hydroxyadenine and 2-amino-N6-hydroxyadenine in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae.

21 January 2018

1 reference

De Novo Guanine Biosynthesis but Not the Riboswitch-Regulated Purine Salvage Pathway Is Required for Staphylococcus aureus Infection In Vivo

21 January 2018

1 reference

Experimental treatment of Staphylococcus aureus bovine intramammary infection using a guanine riboswitch ligand analog

21 January 2018

1 reference

21 January 2018

Microbial thermosensors.

1 reference

Molecular basis for temperature sensing by an RNA thermometer

21 January 2018

1 reference

A novel DNA element that controls bacterial heat shock gene expression.

21 January 2018

1 reference

A mRNA-based thermosensor controls expression of rhizobial heat shock genes

21 January 2018

1 reference

RNA thermometers are common in alpha- and gamma-proteobacteria

21 January 2018

1 reference

Regulation of Pseudomonas aeruginosa virulence factors by two novel RNA thermometers.

21 January 2018

1 reference

Short ROSE-like RNA thermometers control IbpA synthesis in Pseudomonas species

21 January 2018

1 reference

Temperature-controlled structural alterations of an RNA thermometer.

21 January 2018

1 reference

FourU: a novel type of RNA thermometer in Salmonella

21 January 2018

1 reference

Temperature sensing in Yersinia pestis: translation of the LcrF activator protein is thermally regulated

21 January 2018

1 reference

Concerted actions of a thermo-labile regulator and a unique intergenic RNA thermosensor control Yersinia virulence

21 January 2018

1 reference

RNA-mediated thermoregulation of iron-acquisition genes in Shigella dysenteriae and pathogenic Escherichia coli.

21 January 2018

1 reference

RNA thermometer controls temperature-dependent virulence factor expression in Vibrio cholerae

21 January 2018

1 reference

Modulation of the stability of the Salmonella fourU-type RNA thermometer

21 January 2018

1 reference

Translational induction of heat shock transcription factor sigma32: evidence for a built-in RNA thermosensor

21 January 2018

1 reference

An RNA thermosensor controls expression of virulence genes in Listeria monocytogenes

21 January 2018

1 reference

Temperature triggers immune evasion by Neisseria meningitidis

21 January 2018

1 reference

Role for cis-acting RNA sequences in the temperature-dependent expression of the multiadhesive lig proteins in Leptospira interrogans

21 January 2018

1 reference

Alternative mRNA structures of the cIII gene of bacteriophage lambda determine the rate of its translation initiation

21 January 2018

1 reference

The cspA mRNA is a thermosensor that modulates translation of the cold-shock protein CspA.

21 January 2018

1 reference

Three-state mechanism couples ligand and temperature sensing in riboswitches

21 January 2018

1 reference

RNAtips: Analysis of temperature-induced changes of RNA secondary structure

21 January 2018

1 reference

Transient RNA structure features are evolutionarily conserved and can be computationally predicted.

21 January 2018

1 reference

RNAthermsw: direct temperature simulations for predicting the location of RNA thermometers

21 January 2018

1 reference

Tet-Trap, a genetic approach to the identification of bacterial RNA thermometers: application to Pseudomonas aeruginosa

21 January 2018

1 reference

Yersinia Type III Secretion System Master Regulator LcrF

21 January 2018

1 reference

The cytotoxic necrotizing factor of Yersinia pseudotuberculosis (CNFY) enhances inflammation and Yop delivery during infection by activation of Rho GTPases.

21 January 2018

1 reference

Yersinia pseudotuberculosis uses Ail and YadA to circumvent neutrophils by directing Yop translocation during lung infection

21 January 2018

1 reference

Yersinia pestis Ail: multiple roles of a single protein

21 January 2018

1 reference

Glutathione activates virulence gene expression of an intracellular pathogen.

21 January 2018

1 reference

Structural basis for glutathione-mediated activation of the virulence regulatory protein PrfA in Listeria.

21 January 2018

1 reference

Regulation of Listeria virulence: PrfA master and commander

21 January 2018

1 reference

The Listeria transcriptional landscape from saprophytism to virulence.

21 January 2018

1 reference

A trans-acting riboswitch controls expression of the virulence regulator PrfA in Listeria monocytogenes

21 January 2018

1 reference

Regulatory cascade controls virulence in Vibrio cholerae

21 January 2018

1 reference

Structure of Vibrio cholerae ToxT reveals a mechanism for fatty acid regulation of virulence genes

21 January 2018

1 reference

Regulatory networks controlling Vibrio cholerae virulence gene expression

21 January 2018

1 reference

Vibrio cholerae anaerobic induction of virulence gene expression is controlled by thiol-based switches of virulence regulator AphB

21 January 2018

1 reference

Bile salt-induced intermolecular disulfide bond formation activates Vibrio cholerae virulence

21 January 2018

1 reference

Parallel quorum sensing systems converge to regulate virulence in Vibrio cholerae.

21 January 2018

1 reference

Epidemic meningitis, meningococcaemia, and Neisseria meningitidis

21 January 2018

1 reference

Interactions between Neisseria meningitidis and the complement system.

21 January 2018

1 reference

Thermoregulation of Meningococcal fHbp, an Important Virulence Factor and Vaccine Antigen, Is Mediated by Anti-ribosomal Binding Site Sequences in the Open Reading Frame

21 January 2018

1 reference

Large-scale analysis of the meningococcus genome by gene disruption: resistance to complement-mediated lysis

21 January 2018

1 reference

The meningococcal vaccine candidate GNA1870 binds the complement regulatory protein factor H and enhances serum resistance

21 January 2018

1 reference

The epidemiology, pathogenesis and treatment of Pseudomonas aeruginosa infections

21 January 2018

1 reference

The role of quorum sensing in chronic cystic fibrosis Pseudomonas aeruginosa infections

21 January 2018

1 reference

Leptospira: the dawn of the molecular genetics era for an emerging zoonotic pathogen

21 January 2018

1 reference

Heterologous expression of pathogen-specific genes ligA and ligB in the saprophyte Leptospira biflexa confers enhanced adhesion to cultured cells and fibronectin

21 January 2018

1 reference

Changes in transcriptional pausing modify the folding dynamics of the pH-responsive RNA element

21 January 2018

1 reference

A pH-responsive riboregulator

21 January 2018

1 reference

Modulation of the E. coli rpoH Temperature Sensor with Triptycene-Based Small Molecules.

21 January 2018

1 reference

The Speed of RNA Transcription and Metabolite Binding Kinetics Operate an FMN Riboswitch

21 January 2018

1 reference

Leptospiral Immunoglobulin-like Proteins Interact With Human Complement Regulators Factor H, FHL-1, FHR-1, and C4BP

21 January 2018

1 reference

ROSEOFLAVIN, A NEW ANTIMICROBIAL PIGMENT FROM STREPTOMYCES

21 January 2018

1 reference

12 April 2024

https://opencitations.net/index/api/v1/citations/10.7164/ANTIBIOTICS.27.88

Identifiers

DOI

10.1002/WRNA.1429

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28792118%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

1 reference