(Q40200561)

18 September 2017

A classical and ab initio study of the interaction of the myosin triphosphate binding domain with ATP. (English)

1 reference

18 September 2017

5

Peter A Kollman

1 reference

18 September 2017

6

Roberto Car

1 reference

18 September 2017

Todd J Minehardt

1

1 reference

18 September 2017

Nicola Marzari

series ordinal

2

1 reference

18 September 2017

Roger Cooke

series ordinal

3

1 reference

18 September 2017

Edward Pate

series ordinal

4

1 reference

18 September 2017

language of work or name

English

0 references

publication date

1 February 2002

1 reference

18 September 2017

1 reference

18 September 2017

82

1 reference

18 September 2017

2

1 reference

18 September 2017

660-675

1 reference

Molecular dynamics study of the energetic, mechanistic, and structural implications of a closed phosphate tube in ncd

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Structural mechanism of muscle contraction.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

CaATP as a substrate to investigate the myosin lever arm hypothesis of force generation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

X-ray structures of the Dictyostelium discoideum myosin motor domain with six non-nucleotide analogs

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Molecular dynamics and free-energy calculations applied to affinity maturation in antibody 48G7.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Atomic structure of scallop myosin subfragment S1 complexed with MgADP: a novel conformation of the myosin head

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Generalized Gradient Approximation Made Simple

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

The case for a common ancestor: kinesin and myosin motor proteins and G proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Unified Approach for Molecular Dynamics and Density-Functional Theory

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Density-functional exchange-energy approximation with correct asymptotic behavior

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Crystal structure of a bacterial signal peptidase in complex with a beta-lactam inhibitor

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Direction determination in the minus-end-directed kinesin motor ncd

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Crystal structure of a vertebrate smooth muscle myosin motor domain and its complex with the essential light chain: visualization of the pre-power stroke state

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

X-ray crystal structure of the yeast Kar3 motor domain complexed with Mg.ADP to 2.3 A resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

The crystal structure of dimeric kinesin and implications for microtubule-dependent motility

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

X-ray structures of the MgADP, MgATPgammaS, and MgAMPPNP complexes of the Dictyostelium discoideum myosin motor domain

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Reduced surface: an efficient way to compute molecular surfaces

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Switches, latches, and amplifiers: common themes of G proteins and molecular motors

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Active site comparisons highlight structural similarities between myosin and other P-loop proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

X-ray structure of the magnesium(II).ADP.vanadate complex of the Dictyostelium discoideum myosin motor domain to 1.9 A resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Crystal structure of the kinesin motor domain reveals a structural similarity to myosin

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Is myosin a "back door" enzyme?

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

X-ray structures of the myosin motor domain of Dictyostelium discoideum complexed with MgADP.BeFx and MgADP.AlF4-

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Free energy determinants of secondary structure formation: II. Antiparallel beta-sheets

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Free energy determinants of secondary structure formation: I. alpha-Helices

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

22 September 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

22 September 2017

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

inferred from DOI database lookup

7 January 2021

based on heuristic

Electrostatic interactions in macromolecules: theory and applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Mechanics of glycerinated muscle fibers using nonnucleoside triphosphate substrates

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Mechanism of Actomyosin Atpase and the Problem of Muscle Contractio

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Muscle proteins--their actions and interactions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Ab initio molecular dynamics studies on HIV-1 reverse transcriptase triphosphate binding site: implications for nucleoside-analog drug resistance

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Thermodynamics of a reverse turn motif. Solvent effects and side-chain packing

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Actomyosin interaction in striated muscle

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Use of site-directed chemical modification to study an essential lysine in Escherichia coli leader peptidase.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Evaluation of the conformational free energies of loops in proteins.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Ser133 phosphate-KIX interactions in the CREB-CBP complex: an ab initio molecular dynamics study

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Molecular dynamics studies on HIV-1 protease drug resistance and folding pathways

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

A comparative study of galactose oxidase and active site analogs based on QM/MM Car-Parrinello simulations.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

The structure of the nucleotide-binding site of kinesin

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Crystal structure of the motor domain of the kinesin-related motor ncd.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301876

Molecular dynamics with coupling to an external bath

20 August 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

Erratum: Crystal structure of a bacterialsignal peptidase in complex with a β-lactam inhibitor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

Conformational flexibility of the catalytic Asp dyad in HIV-1 protease: An ab initio study on the free enzyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

Soft self-consistent pseudopotentials in a generalized eigenvalue formalism

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

Synthesis of non-nucleotide ATP analogues and characterization of their chemomechanical interaction with muscle fibres

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

Free energy determinants of secondary structure formation: III. beta-turns and their role in protein folding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

Generalized Gradient Approximation Made Simple [Phys. Rev. Lett. 77, 3865 (1996)]

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975429-5

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(02)75429-5

1 reference

18 September 2017

1 reference

18 September 2017

PubMed publication ID

11806909

1 reference