(Q40253533)

18 September 2017

title

Genomic evidence for distinct carbon substrate preferences and ecological niches of Bathyarchaeota in estuarine sediments (English)

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18 September 2017

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Brett J Baker

2

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Kai-Uwe Hinrichs

object named as

Kai-Uwe Hinrichs

6

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Cassandre S Lazar

object named as

Cassandre Sara Lazar

1

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author name string

Kiley Seitz

3

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18 September 2017

Andrew S Hyde

4

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18 September 2017

Gregory J Dick

5

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18 September 2017

Andreas P Teske

7

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18 September 2017

publication date

2 December 2015

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Environmental Microbiology

18 September 2017

published in

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18 September 2017

volume

18

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18 September 2017

issue

4

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18 September 2017

page(s)

1200-1211

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maintained by WikiProject

18 September 2017

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Microbial extracellular enzymes and the marine carbon cycle

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Identification of components of electron transport chains in the extremely thermoacidophilic crenarchaeon Metallosphaera sedula through iron and sulfur compound oxidation transcriptomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.13142

Metabolism of methanogens.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.13142

Energy conservation via electron bifurcating ferredoxin reduction and proton/Na(+) translocating ferredoxin oxidation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

The roles of the polytopic membrane proteins NarK, NarU and NirC in Escherichia coli K-12: two nitrate and three nitrite transporters

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

An extremely thermostable extracellular proteinase from a strain of the archaebacterium Desulfurococcus growing at 88 degrees C.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Halogeometricum rufum sp. nov., a halophilic archaeon from a marine solar saltern, and emended description of the genus Halogeometricum

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Archaea in organic-lean and organic-rich marine subsurface sediments: an environmental gradient reflected in distinct phylogenetic lineages.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Formaldehyde activating enzyme (Fae) and hexulose-6-phosphate synthase (Hps) in Methanosarcina barkeri: a possible function in ribose-5-phosphate biosynthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Energy-converting [NiFe] hydrogenases from archaea and extremophiles: ancestors of complex I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Structure and function of enzymes of the Leloir pathway for galactose metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

The unusual cell biology of the hyperthermophilic Crenarchaeon Ignicoccus hospitalis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

A seven-gene operon essential for formate-dependent nitrite reduction to ammonia by enteric bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Clostridium ljungdahlii represents a microbial production platform based on syngas

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Clustal W and Clustal X version 2.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Environmental controls on intragroup diversity of the uncultured benthic archaea of the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Evidence for microbial carbon and sulfur cycling in deeply buried ridge flank basalt

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Significant contribution of Archaea to extant biomass in marine subsurface sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Environmental evidence for net methane production and oxidation in putative ANaerobic MEthanotrophic (ANME) archaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Predominant archaea in marine sediments degrade detrital proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

ARB: a software environment for sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Tetrahydrofolate and tetrahydromethanopterin compared: functionally distinct carriers in C1 metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Two distinct heterodisulfide reductase-like enzymes in the sulfate-reducing archaeon Archaeoglobus profundus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

IMG/M: the integrated metagenome data management and comparative analysis system

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

The archaeal lipidome in estuarine sediment dominated by members of the Miscellaneous Crenarchaeotal Group

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

The fla gene cluster is involved in the biogenesis of flagella in Halobacterium salinarum

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Acetogenesis and the Wood-Ljungdahl pathway of CO(2) fixation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

A simple energy-conserving system: Proton reduction coupled to proton translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Crenarchaeal heterotrophy in salt marsh sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Enzymology and bioenergetics of respiratory nitrite ammonification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Genome-wide experimental determination of barriers to horizontal gene transfer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

21 January 2018

1 reference

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ProDeGe: a computational protocol for fully automated decontamination of genomes

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.13142

Uncultured archaea in deep marine subsurface sediments: have we caught them all?

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.13142

Metabolic flux analysis of Escherichia coli in glucose-limited continuous culture. II. Dynamic response to famine and feast, activation of the methylglyoxal pathway and oscillatory behaviour

21 January 2018

1 reference

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Identification of a third secondary carrier (DcuC) for anaerobic C4-dicarboxylate transport in Escherichia coli: roles of the three Dcu carriers in uptake and exchange

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Hydrogenase 2 is most and hydrogenase 1 is less responsible for H2 production by Escherichia coli under glycerol fermentation at neutral and slightly alkaline pH

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.13142

Deep sub-seafloor prokaryotes stimulated at interfaces over geological time

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.13142

21 January 2018

Identifiers

DOI

10.1111/1462-2920.13142

1 reference

18 September 2017

1 reference