(Q40540915)

21 September 2017

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title

Theoretical studies of protein folding and unfolding (English)

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21 September 2017

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1

Karplus M

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21 September 2017

Sali A

2

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21 September 2017

language of work or name

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1 February 1995

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Current Opinion in Structural Biology

21 September 2017

published in

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21 September 2017

volume

5

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21 September 2017

issue

1

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21 September 2017

page(s)

58-73

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Formation of a molten globule intermediate early in the kinetic folding pathway of apomyoglobin

21 September 2017

cites work

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Early steps in cytochrome c folding probed by time-resolved circular dichroism and fluorescence spectroscopy

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11 October 2022

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A protein-folding reaction under kinetic control

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11 October 2022

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Detection of transient protein folding populations by mass spectrometry

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11 October 2022

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Generalized protein tertiary structure recognition using associative memory Hamiltonians.

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

The consistency principle in protein structure and pathways of folding

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Does compactness induce secondary structure in proteins? A study of poly-alanine chains computed by distance geometry

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11 October 2022

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Exhaustive conformational search and simulated annealing for models of lattice peptides.

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11 October 2022

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Local and nonlocal interactions in globular proteins and mechanisms of alcohol denaturation

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Laser photo-CIDNP as a surface probe for proteins in solution.

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Lattice model simulations of polypeptide chain folding

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Computer modeling and folding of four-helix bundles

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Protein folding bottlenecks: A lattice Monte Carlo simulation

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Computer simulation of protein folding

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Forces of tertiary structural organization in globular proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Formation of unique structure in polypeptide chains. Theoretical investigation with the aid of a replica approach

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Simulations of the folding of a globular protein

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Solvent-induced organization: a physical model of folding myoglobin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Exploring conformational space with a simple lattice model for protein structure

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

The nature of folded states of globular proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Towards protein folding by global energy optimization

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Understanding how proteins fold: the lysozyme story so far.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

A protein dissection study of a molten globule

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Matching speed and stability

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Characterization of "native" apomyoglobin by molecular dynamics simulation

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Hydrogen bonding, hydrophobicity, packing, and protein folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Differential stability of beta-sheets and alpha-helices in beta-lactamase: a high temperature molecular dynamics study of unfolding intermediates

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Molecular dynamics simulations of helix denaturation

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Chemistry and biology of prions

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Detection of native-like models for amino acid sequences of unknown three-dimensional structure in a data base of known protein conformations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Molecular dynamics simulations of the unfolding of apomyoglobin in water

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Monte Carlo simulations of protein folding. II. Application to protein A, ROP, and crambin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Beta-sheet rearrangements: serpins and beyond

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Theory for the folding and stability of globular proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Reduced representation model of protein structure prediction: statistical potential and genetic algorithms

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Specific nucleus as the transition state for protein folding: evidence from the lattice model.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Dynamic Monte Carlo simulations of a new lattice model of globular protein folding, structure and dynamics

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Polymer principles in protein structure and stability.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Extracting information on folding from the amino acid sequence: accurate predictions for protein regions with preferred conformation in the absence of tertiary interactions

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Residues in chaperonin GroEL required for polypeptide binding and release

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

De novo and inverse folding predictions of protein structure and dynamics

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Monte Carlo simulations of protein folding. I. Lattice model and interaction scheme.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Transient conformational states in proteins followed by differential labeling

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

NMR and protein folding: equilibrium and stopped-flow studies

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

A method for predicting protein structure from sequence.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Protein Unfolding Pathways Explored Through Molecular Dynamics Simulations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

A new approach to the design of stable proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

The barriers in protein folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Molecular dynamics simulations of the unfolding of an alpha-helical analogue of ribonuclease A S-peptide in water

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Side-chain entropy and packing in proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

An analysis of protein folding pathways

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Detailed ab initio prediction of lysozyme–antibody complex with 1.6 Å accuracy

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Unified theory of collapse, folding, and glass transitions in associative-memory Hamiltonian models of proteins.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Modeling compact denatured states of proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Characterization of the transition state of protein unfolding by use of molecular dynamics: chymotrypsin inhibitor 2

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Computational complexity of a problem in molecular structure prediction

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Intermediates in the folding reactions of small proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Prediction of the folding pathways and structure of the GCN4 leucine zipper

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Unfolding and refolding of the native structure of bovine pancreatic trypsin inhibitor studied by computer simulations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Sequence-structure relationships in proteins and copolymers

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

The molten globule is a third thermodynamical state of protein molecules.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Unfolding of an ?-helix in water

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Urea denaturation of barnase: pH dependence and characterization of the unfolded state

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Implications of thermodynamics of protein folding for evolution of primary sequences

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Kinetics of protein folding. A lattice model study of the requirements for folding to the native state.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Simulation of the thermal denaturation of hen egg white lysozyme: trapping the molten globule state

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Minimum energy compact structures of random sequences of heteropolymers

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Toward protein tertiary structure recognition by means of associative memory hamiltonians

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Fast folding of a prototypic polypeptide: the immunoglobulin binding domain of streptococcal protein G.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Protein folding dynamics: the diffusion-collision model and experimental data

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Prediction of protein folding pathways: Bovine pancreatic trypsin inhibitor

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

The sixth Datta Lecture. Protein folding and stability: the pathway of folding of barnase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Protein folding: predicting predicting

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Folding of chymotrypsin inhibitor 2. 2. Influence of proline isomerization on the folding kinetics and thermodynamic characterization of the transition state of folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Proteins with selected sequences fold into unique native conformation

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Jubilee Lecture. Pathway and stability of protein folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

A simplified amino acid potential for use in structure predictions of proteins.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Protein folding. Secrets of a double-doughnut.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Protein folding studied using hydrogen-exchange labeling and two-dimensional NMR

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Folding and stability of a tryptophan-containing mutant of ubiquitin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

The crystal structure of the bacterial chaperonin GroEL at 2.8 A

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Finding the lowest free energy conformation of a protein is an NP-hard problem: proof and implications.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

A lattice statistical mechanics model of the conformational and sequence spaces of proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Complexity of protein folding.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Prediction of protein conformation on the basis of a search for compact structures: test on avian pancreatic polypeptide

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Folding protein alpha-carbon chains into compact forms by Monte Carlo methods

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Bovine endothelial cell plasminogen activator inhibitor. Purification and heat activation

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Molecular theory of associative memory Hamiltonian models of protein folding.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Statistical mechanics of proteins with "evolutionary selected" sequences

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Boltzmann's principle, knowledge-based mean fields and protein folding. An approach to the computational determination of protein structures

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Properties and origins of protein secondary structure

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Prediction of protein folding pathways

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0959-440X(95)80010-X

Identifiers

DOI

10.1016/0959-440X(95)80010-X

1 reference

21 September 2017

1 reference