(Q40593974)

21 September 2017

iRSpot-GAEnsC: identifing recombination spots via ensemble classifier and extending the concept of Chou's PseAAC to formulate DNA samples (English)

1 reference

21 September 2017

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26319782%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

author name string

Maqsood Hayat

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26319782%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

publication date

30 August 2015

1 reference

Molecular Genetics and Genomics

21 September 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26319782%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

volume

291

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26319782%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26319782%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

page(s)

285-296

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26319782%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1007/s00438-015-1108-5

1 June 2020

exact match

0 references

cites work

Prediction of metalloproteinase family based on the concept of Chou's pseudo amino acid composition using a machine learning approach

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Random forest Gini importance favours SNPs with large minor allele frequency: impact, sources and recommendations.

21 January 2018

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Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iNuc-PhysChem: a sequence-based predictor for identifying nucleosomes via physicochemical properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iTIS-PseTNC: a sequence-based predictor for identifying translation initiation site in human genes using pseudo trinucleotide composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

PseKNC: a flexible web server for generating pseudo K-tuple nucleotide composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Pseudo nucleotide composition or PseKNC: an effective formulation for analyzing genomic sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of protein cellular attributes using pseudo-amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Using subsite coupling to predict signal peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Some remarks on protein attribute prediction and pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Some remarks on predicting multi-label attributes in molecular biosystems

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Impacts of bioinformatics to medicinal chemistry

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Euk-mPLoc: a fusion classifier for large-scale eukaryotic protein subcellular location prediction by incorporating multiple sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Recent progress in protein subcellular location prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Signal-CF: a subsite-coupled and window-fusing approach for predicting signal peptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iLoc-Euk: a multi-label classifier for predicting the subcellular localization of singleplex and multiplex eukaryotic proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iLoc-Hum: using the accumulation-label scale to predict subcellular locations of human proteins with both single and multiple sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou׳s general PseAAC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of cell wall lytic enzymes using Chou's amphiphilic pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Identification of mycobacterial membrane proteins and their types using over-represented tripeptide compositions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iCTX-type: a sequence-based predictor for identifying the types of conotoxins in targeting ion channels

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

DROP: an SVM domain linker predictor trained with optimal features selected by random forest.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Predicting DNA-binding proteins: approached from Chou's pseudo amino acid composition and other specific sequence features

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iHSP-PseRAAAC: Identifying the heat shock protein families using pseudo reduced amino acid alphabet composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Use of fuzzy clustering technique and matrices to classify amino acids and its impact to Chou's pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of G-protein-coupled receptor classes in low homology using Chou's pseudo amino acid composition with approximate entropy and hydrophobicity patterns

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Predicting protein folding rates using the concept of Chou's pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iNuc-PseKNC: a sequence-based predictor for predicting nucleosome positioning in genomes with pseudo k-tuple nucleotide composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Discriminating outer membrane proteins with Fuzzy K-nearest Neighbor algorithms based on the general form of Chou's PseAAC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Mem-PHybrid: hybrid features-based prediction system for classifying membrane protein types

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

PSOFuzzySVM-TMH: identification of transmembrane helix segments using ensemble feature space by incorporated fuzzy support vector machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of membrane proteins using split amino acid and ensemble classification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

TargetFreeze: Identifying Antifreeze Proteins via a Combination of Weights using Sequence Evolutionary Information and Pseudo Amino Acid Composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iPPI-Esml: An ensemble classifier for identifying the interactions of proteins by incorporating their physicochemical properties and wavelet transforms into PseAAC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Spo11 and the Formation of DNA Double-Strand Breaks in Meiosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Identifying GPCRs and their types with Chou's pseudo amino acid composition: an approach from multi-scale energy representation and position specific scoring matrix

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

CE-PLoc: an ensemble classifier for predicting protein subcellular locations by fusing different modes of pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Discrimination of acidic and alkaline enzyme using Chou's pseudo amino acid composition in conjunction with probabilistic neural network model

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

DNA-Prot: identification of DNA binding proteins from protein sequence information using random forest.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iORI-PseKNC: A predictor for identifying origin of replication with pseudo k-tuple nucleotide composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Predicting subcellular localization of mycobacterial proteins by using Chou's pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of subcellular localization of apoptosis protein using Chou's pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

GPCR-GIA: a web-server for identifying G-protein coupled receptors and their families with grey incidence analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Using over-represented tetrapeptides to predict protein submitochondria locations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Sequence-dependent prediction of recombination hotspots in Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Identification of real microRNA precursors with a pseudo structure status composition approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

repDNA: a Python package to generate various modes of feature vectors for DNA sequences by incorporating user-defined physicochemical properties and sequence-order effects

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Investigation on critical structural motifs of ligands for triggering glucocorticoid receptor nuclear migration through molecular docking simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iDNA-Methyl: identifying DNA methylation sites via pseudo trinucleotide composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Pse-in-One: a web server for generating various modes of pseudo components of DNA, RNA, and protein sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Sequence based prediction of DNA-binding proteins based on hybrid feature selection using random forest and Gaussian naïve Bayes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of cancer drugs by chemical-chemical interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of protein subcellular localization by incorporating multiobjective PSO-based feature subset selection into the general form of Chou's PseAAC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of cyclin proteins using Chou's pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of GABAA receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of allergenic proteins by means of the concept of Chou's pseudo amino acid composition and a machine learning approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Identifying bacterial virulent proteins by fusing a set of classifiers based on variants of Chou's pseudo amino acid composition and on evolutionary information

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of G-protein-coupled receptor classes based on the concept of Chou's pseudo amino acid composition: an approach from discrete wavelet transform.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iRSpot-TNCPseAAC: identify recombination spots with trinucleotide composition and pseudo amino acid components

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iMethyl-PseAAC: identification of protein methylation sites via a pseudo amino acid composition approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Probabilistic neural networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

GPCR-CA: A cellular automaton image approach for predicting G-protein-coupled receptor functional classes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Quat-2L: a web-server for predicting protein quaternary structural attributes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iGPCR-drug: a web server for predicting interaction between GPCRs and drugs in cellular networking

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iAMP-2L: a two-level multi-label classifier for identifying antimicrobial peptides and their functional types.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iCataly-PseAAC: Identification of Enzymes Catalytic Sites Using Sequence Evolution Information with Grey Model GM (2,1).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iSNO-PseAAC: predict cysteine S-nitrosylation sites in proteins by incorporating position specific amino acid propensity into pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteine S-nitrosylation sites in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Prediction of the types of ion channel-targeted conotoxins based on radial basis function network

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Supersecondary structure prediction using Chou's pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1108-5

Identification of Heat Shock Protein families and J-protein types by incorporating Dipeptide Composition into Chou's general PseAAC.

21 January 2018

1 reference

12 December 2020

iSS-PseDNC: identifying splicing sites using pseudo dinucleotide composition.

1 reference

12 December 2020

iMiRNA-PseDPC: microRNA precursor identification with a pseudo distance-pair composition approach

1 reference

12 December 2020

Predicting protein-ATP binding sites from primary sequence through fusing bi-profile sampling of multi-view features

1 reference

12 December 2020

PseKNC-General: a cross-platform package for generating various modes of pseudo nucleotide compositions

1 reference

12 December 2020

iDNA-Prot|dis: identifying DNA-binding proteins by incorporating amino acid distance-pairs and reduced alphabet profile into the general pseudo amino acid composition

1 reference

12 December 2020

Predicting secretory proteins of malaria parasite by incorporating sequence evolution information into pseudo amino acid composition via grey system model

1 reference

12 December 2020

repRNA: a web server for generating various feature vectors of RNA sequences.

1 reference

12 December 2020

iUbiq-Lys: prediction of lysine ubiquitination sites in proteins by extracting sequence evolution information via a gray system model.

1 reference

12 December 2020

Identification of DNA-binding proteins by incorporating evolutionary information into pseudo amino acid composition via the top-n-gram approach

1 reference

12 December 2020

iNitro-Tyr: prediction of nitrotyrosine sites in proteins with general pseudo amino acid composition

1 reference

12 December 2020