(Q45954150)

18 December 2017

title

repRNA: a web server for generating various feature vectors of RNA sequences. (English)

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18 December 2017

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5

Kuo-Chen Chou

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18 December 2017

author name string

Bin Liu

1

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18 December 2017

Fule Liu

2

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18 December 2017

Longyun Fang

3

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18 December 2017

Xiaolong Wang

4

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18 December 2017

publication date

18 June 2015

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18 December 2017

Molecular Genetics and Genomics

published in

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18 December 2017

volume

291

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18 December 2017

issue

1

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18 December 2017

page(s)

473-481

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18 December 2017

https://scigraph.springernature.com/pub.10.1007/s00438-015-1078-7

exact match

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cites work

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Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition

21 January 2018

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iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition

21 January 2018

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PseKNC: a flexible web server for generating pseudo K-tuple nucleotide composition.

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PseKNC-General: a cross-platform package for generating various modes of pseudo nucleotide compositions

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Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes

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Some remarks on protein attribute prediction and pseudo amino acid composition

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Impacts of bioinformatics to medicinal chemistry

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Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou׳s general PseAAC.

21 January 2018

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PseAAC-Builder: a cross-platform stand-alone program for generating various special Chou's pseudo-amino acid compositions

21 January 2018

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PseAAC-General: fast building various modes of general form of Chou's pseudo-amino acid composition for large-scale protein datasets

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Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses

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kmer-SVM: a web server for identifying predictive regulatory sequence features in genomic data sets

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Use of fuzzy clustering technique and matrices to classify amino acids and its impact to Chou's pseudo amino acid composition.

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Enhanced regulatory sequence prediction using gapped k-mer features

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21 January 2018

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Discrimination of acidic and alkaline enzyme using Chou's pseudo amino acid composition in conjunction with probabilistic neural network model

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Prediction of β-lactamase and its class by Chou's pseudo-amino acid composition and support vector machine

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Discriminative prediction of mammalian enhancers from DNA sequence.

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iPro54-PseKNC: a sequence-based predictor for identifying sigma-54 promoters in prokaryote with pseudo k-tuple nucleotide composition

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Protein Remote Homology Detection by Combining Chou's Pseudo Amino Acid Composition and Profile-Based Protein Representation

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iDNA-Prot|dis: identifying DNA-binding proteins by incorporating amino acid distance-pairs and reduced alphabet profile into the general pseudo amino acid composition

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Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection.

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Identification of real microRNA precursors with a pseudo structure status composition approach

21 January 2018

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repDNA: a Python package to generate various modes of feature vectors for DNA sequences by incorporating user-defined physicochemical properties and sequence-order effects

21 January 2018

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PseDNA-Pro: DNA-Binding Protein Identification by Combining Chou's PseAAC and Physicochemical Distance Transformation.

21 January 2018

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Multi-kernel transfer learning based on Chou's PseAAC formulation for protein submitochondria localization

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Prediction of GABAA receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine

21 January 2018

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Prediction of allergenic proteins by means of the concept of Chou's pseudo amino acid composition and a machine learning approach

21 January 2018

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Prediction of metalloproteinase family based on the concept of Chou's pseudo amino acid composition using a machine learning approach

21 January 2018

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Chou's pseudo amino acid composition improves sequence-based antifreeze protein prediction

21 January 2018

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Genetic programming for creating Chou's pseudo amino acid based features for submitochondria localization

21 January 2018

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iRSpot-TNCPseAAC: identify recombination spots with trinucleotide composition and pseudo amino acid components

21 January 2018

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A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1078-7

PseAAC: a flexible web server for generating various kinds of protein pseudo amino acid composition

21 January 2018

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Improved and Promising Identification of Human MicroRNAs by Incorporating a High-Quality Negative Set.

21 January 2018

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21 January 2018

12 December 2020

Classification of real and pseudo microRNA precursors using local structure-sequence features and support vector machine.

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A k-mer scheme to predict piRNAs and characterize locust piRNAs

21 January 2018

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Molecular science for drug development and biomedicine

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00438-015-1078-7

Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1078-7

iSS-PseDNC: identifying splicing sites using pseudo dinucleotide composition.

21 January 2018

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12 December 2020

iMiRNA-PseDPC: microRNA precursor identification with a pseudo distance-pair composition approach

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12 December 2020

iCTX-type: a sequence-based predictor for identifying the types of conotoxins in targeting ion channels

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12 December 2020

Pse-in-One: a web server for generating various modes of pseudo components of DNA, RNA, and protein sequences

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12 December 2020

Protein remote homology detection by combining Chou's distance-pair pseudo amino acid composition and principal component analysis.

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12 December 2020

Prediction of protein cellular attributes using pseudo-amino acid composition

1 reference

12 December 2020

10.1007/S00438-015-1078-7

Identifiers

DOI

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18 December 2017

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1 reference

18 December 2017