(Q40744836)

23 September 2017

Accurate identification of novel human genes through simultaneous gene prediction in human, mouse, and rat. (English)

1 reference

23 September 2017

Marina Alexandersson

4

0 references

Lior Pachter

series ordinal

6

object named as

Lior Pachter

1 reference

23 September 2017

1

Colin Dewey

1 reference

23 September 2017

Jia Qian Wu

2

1 reference

PMCID

383310

23 September 2017

Simon Cawley

series ordinal

3

1 reference

PMCID

383310

23 September 2017

Richard Gibbs

series ordinal

5

1 reference

23 September 2017

1 April 2004

1 reference

23 September 2017

1 reference

23 September 2017

14

1 reference

23 September 2017

661-664

1 reference

23 September 2017

4

1 reference

MAVID: constrained ancestral alignment of multiple sequences

23 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Low conservation of alternative splicing patterns in the human and mouse genomes.

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Conservation of human alternative splice events in mouse

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Comparison of mouse and human genomes followed by experimental verification yields an estimated 1,019 additional genes

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Comparative gene prediction in human and mouse

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Initial sequencing and comparative analysis of the mouse genome

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Current methods of gene prediction, their strengths and weaknesses

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

The human genome browser at UCSC

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Genie--gene finding in Drosophila melanogaster

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Prediction of complete gene structures in human genomic DNA

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

SLAM: cross-species gene finding and alignment with a generalized pair hidden Markov model

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Improving gene recognition accuracy by combining predictions from two gene-finding programs.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Integrating genomic homology into gene structure prediction.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Evaluation of gene structure prediction programs.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

Applications of Generalized Pair Hidden Markov Models to Alignment and Gene Finding Problems

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383310

HMM sampling and applications to gene finding and alternative splicing

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15060007

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.1939804

1 reference

23 September 2017

1 reference

23 September 2017

1 reference

PMCID

383310