(Q41478813)

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Triaging informative cis-regulatory elements for the combinatorial control of temporal gene expression during Plasmodium falciparum intraerythrocytic development

scientific article published on 5 February 2015

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scholarly article

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Europe PubMed Central

PMC publication ID

1 October 2017

Triaging informative cis-regulatory elements for the combinatorial control of temporal gene expression during Plasmodium falciparum intraerythrocytic development (English)

1 reference

Europe PubMed Central

PMC publication ID

1 October 2017

Plasmodium falciparum

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cis-regulatory element

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based on heuristic

inferred from title

2

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25652008%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

3

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25652008%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

author name string

Karen Russell

1

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Europe PubMed Central

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1 June 2020

publication date

5 February 2015

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Europe PubMed Central

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1 October 2017

Parasites and Vectors

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25652008%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

8

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1 June 2020

81

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Europe PubMed Central

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1 June 2020

copyright license

Creative Commons Attribution 4.0 International

5 February 2015

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April 2022 Public Data File from Crossref

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DNA-encoded nucleosome occupancy is associated with transcription levels in the human malaria parasite Plasmodium falciparum

1 reference

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11 June 2018

Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression

1 reference

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11 June 2018

A transcriptional switch underlies commitment to sexual development in malaria parasites

1 reference

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11 June 2018

A cascade of DNA-binding proteins for sexual commitment and development in Plasmodium

1 reference

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11 June 2018

Analysis of the spatial and temporal arrangement of transcripts over intergenic regions in the human malarial parasite Plasmodium falciparum.

1 reference

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Identification of an AP2-family protein that is critical for malaria liver stage development

1 reference

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11 June 2018

The Apicomplexan AP2 family: integral factors regulating Plasmodium development

1 reference

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11 June 2018

Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite

1 reference

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11 June 2018

Nucleosome occupancy at transcription start sites in the human malaria parasite: a hard-wired evolution of virulence?

1 reference

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11 June 2018

A major role for the Plasmodium falciparum ApiAP2 protein PfSIP2 in chromosome end biology

1 reference

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11 June 2018

Chromatin modifications: implications in the regulation of gene expression in Toxoplasma gondii.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Nucleosome landscape and control of transcription in the human malaria parasite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Transcriptional profiling of growth perturbations of the human malaria parasite Plasmodium falciparum

1 reference

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11 June 2018

Transcription factor AP2-Sp and its target genes in malarial sporozoites.

1 reference

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11 June 2018

Genome-wide nucleosome mapping of Plasmodium falciparum reveals histone-rich coding and histone-poor intergenic regions and chromatin remodeling of core and subtelomeric genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Structural Determinants of DNA Binding by a P. falciparum ApiAP2 Transcriptional Regulator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Identification of a transcription factor in the mosquito-invasive stage of malaria parasites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Patterns of gene-specific and total transcriptional activity during the Plasmodium falciparum intraerythrocytic developmental cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Control of gene expression in Plasmodium falciparum - ten years on.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Core promoters are predicted by their distinct physicochemical properties in the genome of Plasmodium falciparum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

A genetically hard-wired metabolic transcriptome in Plasmodium falciparum fails to mount protective responses to lethal antifolates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Plasmodium gene regulation: far more to factor in.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Dynamic RNA profiling in Plasmodium falciparum synchronized blood stages exposed to lethal doses of artesunate

1 reference

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11 June 2018

Discovering regulatory motifs in the Plasmodium genome using comparative genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

Specific DNA-binding by apicomplexan AP2 transcription factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

11 June 2018

In silico discovery of transcription regulatory elements in Plasmodium falciparum.

1 reference

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11 June 2018

A universal framework for regulatory element discovery across all genomes and data types

1 reference

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11 June 2018

Mechanisms of gene regulation in Plasmodium.

1 reference

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11 June 2018

Whole-genome analysis of mRNA decay in Plasmodium falciparum reveals a global lengthening of mRNA half-life during the intra-erythrocytic development cycle

1 reference

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1 reference

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11 June 2018

Regulatory motifs uncovered among gene expression clusters in Plasmodium falciparum

1 reference

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Comparative whole genome transcriptome analysis of three Plasmodium falciparum strains

1 reference

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11 June 2018

Combinatorial gene regulation in Plasmodium falciparum

1 reference

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1 reference

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The Plasmodium falciparum sexual development transcriptome: a microarray analysis using ontology-based pattern identification

1 reference

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Global analysis of transcript and protein levels across the Plasmodium falciparum life cycle

1 reference

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11 June 2018

Comparative genomics of transcriptional control in the human malaria parasite Plasmodium falciparum

1 reference

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Plasmodium biology: genomic gleanings

1 reference

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1 reference

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1 reference

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11 June 2018

Gene regulation in the intraerythrocytic cycle of Plasmodium falciparum

1 reference

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Plasmodium falciparum: Preinitiation complex occupancy of active and inactive promoters during erythrocytic stage.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

19 August 2018

Positive and negative effects of deletions and mutations within the 5' flanking sequences of Plasmodium falciparum DNA polymerase delta.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322800

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Mutational analysis identifies a five base pair cis-acting sequence essential for GBP130 promoter activity in Plasmodium falciparum

1 reference

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19 August 2018

Identifiers

10.1186/S13071-015-0701-0

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25652008%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

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Europe PubMed Central

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1 June 2020

PubMed publication ID

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Europe PubMed Central

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1 June 2020

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