(Q41819854)

12 October 2017

How do potentials derived from structural databases relate to "true" potentials? (English)

1 reference

12 October 2017

L Zhang

1

1 reference

PMC publication ID

2143818

12 October 2017

J Skolnick

series ordinal

2

1 reference

12 October 2017

1 January 1998

1 reference

12 October 2017

1 reference

12 October 2017

7

1 reference

12 October 2017

1

1 reference

12 October 2017

112-122

1 reference

Derivation and testing of pair potentials for protein folding. When is the quasichemical approximation correct?

12 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Knowledge-based potentials for protein folding: what can we learn from known protein structures?

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Potential energy functions for threading

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Boltzmann's principle, knowledge-based mean fields and protein folding. An approach to the computational determination of protein structures

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Knowledge-based potentials for proteins

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Prediction of protein conformation

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

A computer model to dynamically simulate protein folding: studies with crambin.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Contact potential that recognizes the correct folding of globular proteins

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Statistical potentials extracted from protein structures: how accurate are they?

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Monte Carlo simulations of protein folding. I. Lattice model and interaction scheme.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Factors influencing the ability of knowledge-based potentials to identify native sequence-structure matches

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Are proteins ideal mixtures of amino acids? Analysis of energy parameter sets

18 August 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560070112

Optimal protein-folding codes from spin-glass theory

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560070112

Emergence of Preferred Structures in a Simple Model of Protein Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560070112

The crystal structure of a mutant protein with altered but improved hydrophobic core packing

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560070112

How to derive a protein folding potential? A new approach to an old problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560070112

Prediction of protein backbone conformation based on seven structure assignments. Influence of local interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560070112

Protein structure prediction force fields: parametrization with quasi-newtonian dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560070112

Step-wise mutation of barnase to binase. A procedure for engineering increased stability of proteins and an experimental analysis of the evolution of protein stability

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143818

Protein fold recognition and dynamics in the space of contact maps

3 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9514266

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Search for the most stable folds of protein chains: I. Application of a self-consistent molecular field theory to a problem of protein three-dimensional structure prediction

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9514266

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Why do protein architectures have Boltzmann-like statistics?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9514266

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/PRO.5560070112

1 reference

12 October 2017

1 reference

PMC publication ID

2143818

12 October 2017

PubMed publication ID

9514266

1 reference

PMC publication ID

2143818