(Q42060759)

15 October 2017

Meta-analysis of quantification methods shows that archaea and bacteria have similar abundances in the subseafloor (English)

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15 October 2017

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Megan K May

2

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author name string

Karen G Lloyd

series ordinal

1

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15 October 2017

Richard T Kevorkian

series ordinal

3

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15 October 2017

Andrew D Steen

series ordinal

4

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15 October 2017

language of work or name

English

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publication date

4 October 2013

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Applied and Environmental Microbiology

15 October 2017

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15 October 2017

79

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15 October 2017

24

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15 October 2017

7790-7799

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describes a project that uses

15 October 2017

1 reference

10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=3837824

cites work

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Predominant archaea in marine sediments degrade detrital proteins.

5 June 2018

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Turnover of microbial lipids in the deep biosphere and growth of benthic archaeal populations

5 June 2018

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5 June 2018

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Global distribution of microbial abundance and biomass in subseafloor sediment

5 June 2018

1 reference

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Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments

5 June 2018

1 reference

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Quantification of Microbial Communities in Subsurface Marine Sediments of the Black Sea and off Namibia

5 June 2018

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Anaerobic Oxidation of Methane at a Marine Methane Seep in a Forearc Sediment Basin off Sumatra, Indian Ocean

5 June 2018

1 reference

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Reliability of CARD-FISH procedure for enumeration of Archaea in deep-sea surficial sediments.

5 June 2018

1 reference

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Murein and pseudomurein cell wall binding domains of bacteria and archaea--a comparative view

5 June 2018

1 reference

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The deep biosphere in terrestrial sediments in the chesapeake bay area, virginia, USA

5 June 2018

1 reference

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Environmental evidence for net methane production and oxidation in putative ANaerobic MEthanotrophic (ANME) archaea

5 June 2018

1 reference

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The archaeal cell envelope

5 June 2018

1 reference

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Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): A quantitative review of published reports

5 June 2018

1 reference

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Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307).

5 June 2018

1 reference

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Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment

5 June 2018

1 reference

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Significant contribution of Archaea to extant biomass in marine subsurface sediments

5 June 2018

1 reference

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Uncultured archaea in deep marine subsurface sediments: have we caught them all?

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Adaptations to energy stress dictate the ecology and evolution of the Archaea

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

The integrated microbial genomes (IMG) system

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Combining catalyzed reporter deposition-fluorescence in situ hybridization and microautoradiography to detect substrate utilization by bacteria and Archaea in the deep ocean.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

An improved protocol for quantification of freshwater Actinobacteria by fluorescence in situ hybridization

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Archaeal dominance in the mesopelagic zone of the Pacific Ocean

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Visualization and enumeration of marine planktonic archaea and bacteria by using polyribonucleotide probes and fluorescent in situ hybridization

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Proteinase K from Tritirachium album Limber

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Role of ribosome degradation in the death of starved Escherichia coli cells

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Mechanism and regulation of bacterial ribosomal RNA processing

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Gene expression in the deep biosphere.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Prokaryotic cells of the deep sub-seafloor biosphere identified as living bacteria

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837824

Quantification of microbial communities in near-surface and deeply buried marine sediments on the Peru continental margin using real-time PCR

3 November 2018

1 reference

12 December 2020

Endospore abundance, microbial growth and necromass turnover in deep sub-seafloor sediment

1 reference

12 December 2020

Unit cell dimensions of crystalline horseradish peroxidase

1 reference

12 December 2020

Convenient determination of DNA extraction efficiency using an external DNA recovery standard and quantitative-competitive PCR

1 reference

12 December 2020

An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments

1 reference

12 December 2020

Identifiers

DOI

10.1128/AEM.02090-13

1 reference

15 October 2017

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15 October 2017

PubMed publication ID

24096423

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