(Q42272959)

English

Extensive cooperation of immune master regulators IRF3 and NFκB in RNA Pol II recruitment and pause release in human innate antiviral transcription

scientific article published on 29 August 2013

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

Extensive cooperation of immune master regulators IRF3 and NFκB in RNA Pol II recruitment and pause release in human innate antiviral transcription (English)

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

1 reference

based on heuristic

inferred from title

author name string

Jonathan E Freaney

1

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

Rebecca Kim

2

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

Roli Mandhana

3

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

Curt M Horvath

4

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

publication date

29 August 2013

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

4

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

5

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

959-973

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

High-density nucleosome occupancy map of human chromosome 9p21-22 reveals chromatin organization of the type I interferon gene cluster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

The long-range interaction landscape of gene promoters

1 reference

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Landscape of transcription in human cells

1 reference

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Functional association of Gdown1 with RNA polymerase II poised on human genes

1 reference

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26 October 2017

Extensive characterization of NF-κB binding uncovers non-canonical motifs and advances the interpretation of genetic functional traits.

1 reference

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26 October 2017

Mediator and cohesin connect gene expression and chromatin architecture

1 reference

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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

1 reference

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26 October 2017

c-Myc regulates transcriptional pause release

1 reference

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26 October 2017

Widespread transcription at neuronal activity-regulated enhancers

1 reference

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26 October 2017

The human Mediator complex: a versatile, genome-wide regulator of transcription

1 reference

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Immediate mediators of the inflammatory response are poised for gene activation through RNA polymerase II stalling.

1 reference

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26 October 2017

Defining mechanisms that regulate RNA polymerase II transcription in vivo

1 reference

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26 October 2017

Pathogen recognition and inflammatory signaling in innate immune defenses

1 reference

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26 October 2017

Innate immunity to virus infection.

1 reference

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26 October 2017

Model-based analysis of ChIP-Seq (MACS)

1 reference

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26 October 2017

RNA polymerase is poised for activation across the genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

A chromatin landmark and transcription initiation at most promoters in human cells

1 reference

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26 October 2017

An Atomic Model of the Interferon-β Enhanceosome

1 reference

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26 October 2017

Chromatin immunoprecipitation and microarray-based analysis of protein location

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Type I interferons in host defense

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Controlling the elongation phase of transcription with P-TEFb

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

E2A and IRF-4/Pip promote chromatin modification and transcription of the immunoglobulin kappa locus in pre-B cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Molecular determinants of crosstalk between nuclear receptors and toll-like receptors.

1 reference

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26 October 2017

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Dynamic regulation of pol II transcription by the mammalian Mediator complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Mini-review: Specificity and expression of CIITA, the master regulator of MHC class II genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Recent highlights of RNA-polymerase-II-mediated transcription

1 reference

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26 October 2017

Shaping the nuclear action of NF-kappaB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Regulation of RNA polymerase II transcription by sequence-specific DNA binding factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

The Gene Ontology (GO) database and informatics resource

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Interferon regulatory factor-3-mediated activation of the interferon-sensitive response element by Toll-like receptor (TLR) 4 but not TLR3 requires the p65 subunit of NF-kappa.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Regulation of human beta 2-microglobulin transactivation in hematopoietic cells

1 reference

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26 October 2017

The interferon-alpha/beta system in antiviral responses: a multimodal machinery of gene regulation by the IRF family of transcription factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Functional classification of interferon-stimulated genes identified using microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Ordered recruitment of chromatin modifying and general transcription factors to the IFN-beta promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Distinct and essential roles of transcription factors IRF-3 and IRF-7 in response to viruses for IFN-alpha/beta gene induction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Selective DNA binding and association with the CREB binding protein coactivator contribute to differential activation of alpha/beta interferon genes by interferon regulatory factors 3 and 7.

1 reference

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26 October 2017

Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms

1 reference

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26 October 2017

Role of general and gene-specific cofactors in the regulation of eukaryotic transcription

1 reference

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26 October 2017

Evidence that P-TEFb alleviates the negative effect of DSIF on RNA polymerase II-dependent transcription in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Virus infection induces the assembly of coordinately activated transcription factors on the IFN-beta enhancer in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Crystal structure of p50/p65 heterodimer of transcription factor NF-kappaB bound to DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Structure of IRF-1 with bound DNA reveals determinants of interferon regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Virus induction of human IFN beta gene expression requires the assembly of an enhanceosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Identification of a member of the interferon regulatory factor family that binds to the interferon-stimulated response element and activates expression of interferon-induced genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Multiple nuclear factors interact with the immunoglobulin enhancer sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Control of formation of two distinct classes of RNA polymerase II elongation complexes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

26 October 2017

Purification of P-TEFb, a transcription factor required for the transition into productive elongation.

1 reference

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29 May 2018

The involvement of NF-kappa B in beta-interferon gene regulation reveals its role as widely inducible mediator of signal transduction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

29 May 2018

One nucleotide in a kappaB site can determine cofactor specificity for NF-kappaB dimers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

17 August 2018

E47, IRF-4, and PU.1 synergize to induce B-cell-specific activation of the class II transactivator promoter III (CIITA-PIII).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3792498

17 August 2018

Modifying gene expression programs by altering core promoter chromatin architecture.

1 reference

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17 August 2018

Nucleosome sliding via TBP DNA binding in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/23994473

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation of the MHC class II transactivator CIITA by interferon-gamma requires cooperative interaction between Stat1 and USF-1

1 reference

https://pubmed.ncbi.nlm.nih.gov/23994473

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.CELREP.2013.07.043

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

ResearchGate publication ID

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