(Q42604264)

3 November 2017

Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline (English)

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3 November 2017

3

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3 November 2017

7

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3 November 2017

Nicola Ternette

5

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author name string

David C Trudgian

1

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3 November 2017

Gabriela Ridlova

2

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3 November 2017

Mukram M Mackeen

4

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3 November 2017

Oreste Acuto

6

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3 November 2017

Benjamin Thomas

8

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3 November 2017

8 June 2011

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3 November 2017

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3 November 2017

11

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3 November 2017

2790-2797

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3 November 2017

14

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Mass spectrometry-based label-free quantitative proteomics

3 November 2017

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Label-free mass spectrometry-based protein quantification technologies in proteomic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Quantitative proteomic analysis of distinct mammalian Mediator complexes using normalized spectral abundance factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Detecting differential and correlated protein expression in label-free shotgun proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Significance analysis of spectral count data in label-free shotgun proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Absolute quantification of proteins by LCMSE: a virtue of parallel MS acquisition

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Exploration of the normal human bronchoalveolar lavage fluid proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

CPFP: a central proteomics facilities pipeline

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Trans-Proteomic Pipeline supports and improves analysis of electron transfer dissociation data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Open mass spectrometry search algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Open source system for analyzing, validating, and storing protein identification data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

General framework for developing and evaluating database scoring algorithms using the TANDEM search engine

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Assigning significance to peptides identified by tandem mass spectrometry using decoy databases

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Proteomics on an Orbitrap benchtop mass spectrometer using all-ion fragmentation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

A power law global error model for the identification of differentially expressed genes in microarray data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

Statistical Analysis of Membrane Proteome Expression Changes inSaccharomycescerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000800

21 January 2018

Identifiers

DOI

10.1002/PMIC.201000800

1 reference

3 November 2017

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