(Q42642322)

English

The complete mitochondrial genome sequence of the hornwort Phaeoceros laevis: retention of many ancient pseudogenes and conservative evolution of mitochondrial genomes in hornworts

scientific article published on 9 December 2009

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scholarly article

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Europe PubMed Central

PubMed publication ID

4 November 2017

The complete mitochondrial genome sequence of the hornwort Phaeoceros laevis: retention of many ancient pseudogenes and conservative evolution of mitochondrial genomes in hornworts (English)

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Europe PubMed Central

PubMed publication ID

4 November 2017

1 reference

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inferred from title

Phaeoceros laevis

object named as

Phaeoceros laevis

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author name string

Jia-Yu Xue

1

1 reference

Europe PubMed Central

PubMed publication ID

4 November 2017

Yang Liu

2

1 reference

Europe PubMed Central

PubMed publication ID

4 November 2017

Libo Li

3

1 reference

Europe PubMed Central

PubMed publication ID

4 November 2017

Bin Wang

4

1 reference

Europe PubMed Central

PubMed publication ID

4 November 2017

Yin-Long Qiu

5

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Europe PubMed Central

PubMed publication ID

4 November 2017

publication date

9 December 2009

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Europe PubMed Central

PubMed publication ID

4 November 2017

Current Genetics

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Europe PubMed Central

PubMed publication ID

4 November 2017

56

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Europe PubMed Central

PubMed publication ID

4 November 2017

1

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Europe PubMed Central

PubMed publication ID

4 November 2017

53-61

1 reference

Europe PubMed Central

PubMed publication ID

4 November 2017

Plant mitochondrial RNA editing

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Divergent intron conservation in the mitochondrial nad2 gene: signatures for the three bryophyte classes (mosses, liverworts, and hornworts) and the lycophytes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The gain of three mitochondrial introns identifies liverworts as the earliest land plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution of a pseudogene: exclusive survival of a functional mitochondrial nad7 gene supports Haplomitrium as the earliest liverwort lineage and proposes a secondary loss of RNA editing in Marchantiidae

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The complete mitochondrial genome sequence of the liverwort Pleurozia purpurea reveals extremely conservative mitochondrial genome evolution in liverworts

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conservation of RNA secondary structures in two intron families including mitochondrial-, chloroplast- and nuclear-encoded members

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Small repeated sequences and the structure of plant mitochondrial genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Trans-splicing group II introns in plant mitochondria: the complete set of cis-arranged homologs in ferns, fern allies, and a hornwort

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The deepest divergences in land plants inferred from phylogenomic evidence

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distribution of introns in the mitochondrial gene nad1 in land plants: phylogenetic and molecular evolutionary implications

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Discovery of the rpl10 gene in diverse plant mitochondrial genomes and its probable replacement by the nuclear gene for chloroplast RPL10 in two lineages of angiosperms

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mitochondrial genome of the moss Physcomitrella patens sheds new light on mitochondrial evolution in land plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ancestors of trans-splicing mitochondrial introns support serial sister group relationships of hornworts and mosses with vascular plants.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The complete mitochondrial genome sequence of the hornwort Megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Basic local alignment search tool

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An ancestral mitochondrial DNA resembling a eubacterial genome in miniature

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative organization of chloroplast genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mitochondria of protists

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA editing in hornwort chloroplasts makes more than half the genes functional

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Punctuated evolution of mitochondrial gene content: high and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparisons among two fertile and three male-sterile mitochondrial genomes of maize

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

OrganellarGenomeDRAW (OGDRAW): a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Introducing the plant RNA editing prediction and analysis computer tool PREPACT and an update on RNA editing site nomenclature

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mitochondrial DNA of land plants: peculiarities in phylogenetic perspective

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mitochondrial genome of Chara vulgaris: insights into the mitochondrial DNA architecture of the last common ancestor of green algae and land plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

REPuter: the manifold applications of repeat analysis on a genomic scale

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Large-scale analysis of pseudogenes in the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA. A primitive form of plant mitochondrial genome.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The chloroplast and mitochondrial genome sequences of the charophyte Chaetosphaeridium globosum: insights into the timing of the events that restructured organelle DNAs within the green algal lineage that led to land plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Small RNAs originated from pseudogenes: cis- or trans-acting?

1 reference

https://pubmed.ncbi.nlm.nih.gov/19998039

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00294-009-0279-1

1 reference

Europe PubMed Central

PubMed publication ID

4 November 2017

Dimensions Publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 November 2017

ResearchGate publication ID

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