(Q42846930)

English

Molecular dynamics as a tool to detect protein foldability. A mutant of domain B1 of protein G with non-native secondary structure propensities

scientific article published on February 1999

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

Molecular dynamics as a tool to detect protein foldability. A mutant of domain B1 of protein G with non-native secondary structure propensities (English)

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

protein folding

0 references

author name string

Cregut D

1

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

Serrano L

2

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

publication date

1 February 1999

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

Protein Science

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

8

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

2

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

271-282

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

An early intermediate in the folding reaction of the B1 domain of protein G contains a native-like core

1 reference

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"New view" of protein folding reconciled with the old through multiple unfolding simulations.

1 reference

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Theoretical studies of sequence effects on the conformational properties of a fragment of the prion protein: implications for scrapie formation

1 reference

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Role of a nonnative interaction in the folding of the protein G B1 domain as inferred from the conformational analysis of the alpha-helix fragment

1 reference

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MOLMOL: a program for display and analysis of macromolecular structures

1 reference

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Addition of side chain interactions to modified Lifson-Roig helix-coil theory: application to energetics of phenylalanine-methionine interactions.

1 reference

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Boltzmann's principle, knowledge-based mean fields and protein folding. An approach to the computational determination of protein structures

1 reference

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Two crystal structures of the B1 immunoglobulin-binding domain of streptococcal protein G and comparison with NMR

1 reference

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Recognition of errors in three-dimensional structures of proteins

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Sequence determinants of the capping box, a stabilizing motif at the N-termini of alpha-helices

1 reference

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Unfolding and refolding of the native structure of bovine pancreatic trypsin inhibitor studied by computer simulations.

1 reference

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Protein unfolding pathways explored through molecular dynamics simulations

1 reference

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A short linear peptide that folds into a native stable beta-hairpin in aqueous solution

1 reference

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Folding of Protein G B1 Domain Studied by the Conformational Characterization of Fragments Comprising Its Secondary Structure Elements

1 reference

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Analysis of i,i+5 and i,i+8 Hydrophobic Interactions in a Helical Model Peptide Bearing the Hydrophobic Staple Motif

1 reference

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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

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Solvation energy in protein folding and binding

1 reference

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Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

1 reference

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Molecular dynamics simulations in biology

1 reference

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A new approach to the rapid determination of protein side chain conformations

1 reference

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27 May 2018

A novel, highly stable fold of the immunoglobulin binding domain of streptococcal protein G

1 reference

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Thermodynamic analysis of the folding of the streptococcal protein G IgG-binding domains B1 and B2: why small proteins tend to have high denaturation temperatures

1 reference

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Assessment of protein models with three-dimensional profiles

1 reference

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27 May 2018

Kinetic analysis of folding and unfolding the 56 amino acid IgG-binding domain of streptococcal protein G.

1 reference

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Determination of the solution structures of domains II and III of protein G from Streptococcus by 1H nuclear magnetic resonance

1 reference

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1.67-A X-ray structure of the B2 immunoglobulin-binding domain of streptococcal protein G and comparison to the NMR structure of the B1 domain

1 reference

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Chains of alternating sulfur and pi-bonded atoms in eight small proteins

1 reference

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Molecular dynamics simulation of the unfolding of barnase: characterization of the major intermediate

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Modelling protein unfolding: hen egg-white lysozyme

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MD Display: an interactive graphics program for visualization of molecular dynamics trajectories

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The hydrophobic-staple motif and a role for loop-residues in alpha-helix stability and protein folding.

1 reference

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Side-chain interactions between sulfur-containing amino acids and phenylalanine in alpha-helices.

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Acid and thermal denaturation of barnase investigated by molecular dynamics simulations

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural stability of disulfide mutants of basic pancreatic trypsin inhibitor: a molecular dynamics study

1 reference

https://pubmed.ncbi.nlm.nih.gov/10048320

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Criteria that discriminate between native proteins and incorrectly folded models

1 reference

https://pubmed.ncbi.nlm.nih.gov/10048320

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Simulation of the thermal denaturation of hen egg white lysozyme: trapping the molten globule state

1 reference

https://pubmed.ncbi.nlm.nih.gov/10048320

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Investigation of protein unfolding and stability by computer simulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10048320

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1110/PS.8.2.271

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

8 November 2017

ResearchGate publication ID

0 references

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