(Q43947466)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11933066%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

title

Contributions to the binding free energy of ligands to avidin and streptavidin (English)

1 reference

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8 December 2019

2

1 reference

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8 December 2019

author name string

Themis Lazaridis

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11933066%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

Francois Gandolfo

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11933066%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

language of work or name

English

0 references

publication date

1 May 2002

1 reference

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8 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11933066%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

volume

47

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11933066%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11933066%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

page(s)

194-208

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11933066%20AND%20SRC:MED&resulttype=core&format=json

Molecular recognition in proteins. Simulation analysis of substrate binding by a tyrosyl-tRNA synthetase mutant.

8 December 2019

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On the calculation of binding free energies using continuum methods: application to MHC class I protein-peptide interactions

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21 January 2018

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Binding of a diverse set of ligands to avidin and streptavidin: an accurate quantitative prediction of their relative affinities by a combination of molecular mechanics and continuum solvent models

21 January 2018

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Prediction of Binding Affinities for TIBO Inhibitors of HIV-1 Reverse Transcriptase Using Monte Carlo Simulations in a Linear Response Method

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Absolute and relative binding free energy calculations of the interaction of biotin and its analogs with streptavidin using molecular dynamics/free energy perturbation approaches

21 January 2018

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What determines the strength of noncovalent association of ligands to proteins in aqueous solution?

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The statistical-thermodynamic basis for computation of binding affinities: a critical review

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Ligand binding: molecular mechanics calculation of the streptavidin-biotin rupture force

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Molecular dynamics study of unbinding of the avidin-biotin complex

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Principles of protein-protein recognition

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The contribution of vibrational entropy to molecular association. The dimerization of insulin.

21 January 2018

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Contribution of hydration to protein folding thermodynamics. II. The entropy and Gibbs energy of hydration

21 January 2018

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Discrimination of the native from misfolded protein models with an energy function including implicit solvation

21 January 2018

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Understanding beta-hairpin formation

21 January 2018

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Exploration of partially unfolded states of human alpha-lactalbumin by molecular dynamics simulation

21 January 2018

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"New view" of protein folding reconciled with the old through multiple unfolding simulations.

21 January 2018

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Unfolding proteins by external forces and temperature: the importance of topology and energetics

21 January 2018

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Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations

21 January 2018

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Protein folding and function: the N-terminal fragment in adenylate kinase

21 January 2018

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Solvent effects on the energy landscapes and folding kinetics of polyalanine

21 January 2018

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Structural origins of high-affinity biotin binding to streptavidin

21 January 2018

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Three-dimensional structure of the tetragonal crystal form of egg-white avidin in its functional complex with biotin at 2.7 A resolution

21 January 2018

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Binding to protein targets of peptidic leads discovered by phage display: crystal structures of streptavidin-bound linear and cyclic peptide ligands containing the HPQ sequence

21 January 2018

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Empirical scale of side-chain conformational entropy in protein folding

21 January 2018

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Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

21 January 2018

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Crystal structure and ligand-binding studies of a screened peptide complexed with streptavidin

21 January 2018

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Calculation of the free energy of association for protein complexes

21 January 2018

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21 January 2018

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An increase in side chain entropy facilitates effector binding: NMR characterization of the side chain methyl group dynamics in Cdc42Hs

21 January 2018

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Structural studies of the streptavidin binding loop

21 January 2018

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Dynamics of protein ligand binding on multiple time scales: NADH binding to lactate dehydrogenase

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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The price of lost freedom: entropy of bimolecular complex formation

21 January 2018

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Simulation of activation free energies in molecular systems

21 January 2018

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21 January 2018

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On the unfolding of alpha-lytic protease and the role of the pro region

21 January 2018

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Side-chain conformational entropy in protein unfolded states

21 January 2018

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Increased protein backbone conformational entropy upon hydrophobic ligand binding

21 January 2018

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Do active site conformations of small ligands correspond to low free-energy solution structures?

21 January 2018

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The sensitivity of the results of molecular docking to induced fit effects: application to thrombin, thermolysin and neuraminidase

21 January 2018

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21 January 2018

Avidin and streptavidin

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10086